KEGG   Trichoderma reesei QM6a: TRIREDRAFT_105351
Entry
TRIREDRAFT_105351 CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03040  Spliceosome
tre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIREDRAFT_105351
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TRIREDRAFT_105351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tre03041]
    TRIREDRAFT_105351
   04121 Ubiquitin system [BR:tre04121]
    TRIREDRAFT_105351
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_105351
Enzymes [BR:tre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     TRIREDRAFT_105351
Spliceosome [BR:tre03041]
 Complex B
  Other components
   Prp19 complex
    TRIREDRAFT_105351
 Complex C
   Prp19-CDC5 complex
    TRIREDRAFT_105351
Ubiquitin system [BR:tre04121]
 Ubiquitin ligases (E3)
  U-box type E3
   TRIREDRAFT_105351
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    TRIREDRAFT_105351
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WDR55 ANAPC4_WD40 Beta-prop_WDR5 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd B-prop_COPA_B_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 zf-Nse V_ATPase_I_N WD40_RFWD3 NBCH_WD40 HTH_SUN2 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 18481019
NCBI-ProteinID: XP_006963652
JGI: Trire2_105351
UniProt: G0RE64
LinkDB
Position
Unknown
AA seq 475 aa
MQCVLSGEAPQEPVASKKSGIVYEKRLIEQYINEHGTEPNGEALTVEDLLPINTSRIPRP
RPPTLTSIPALLATFQNEWDNLALETYNLREQLARTREELATALYQHDAAVRVIARLTKE
RDEARDSLSKITVTDGAANGDGMVVDSVEALPEDLAAQVDSVHQSLSKGRKKRSVPEGWV
SSDQVSSFETTTTNALPVPRATALDVEGSYAVAGGLNGEAAIYSVEADNVERTIPVGEPV
TDTLWAGSKVFFATSQGNVKVYEAGNEVGTLSEHAGPASGLSLHPSGDLLASVGTDKSIV
FYHLETMKRVSRAYADASLTTCAFHPDGHLFAAGTVTGDIKLYMTKNLEQAVVFKLGAPV
QALVFSENGFMLAATAKGQTSVTIFDLRKEGDAAVSKVLETGGSVQSLAWDYTGQFLATG
GATGITVQQYTKSSKKWSEPLRNSVAAVAVRWGESGQKLISLNGEGVVTVLGVKE
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgcagtgcgtgctctccggagaagctcctcaagagcctgtcgcgtccaagaagtcgggc
atcgtctacgagaagcggctgatagaacagtacatcaatgagcacggcacagaacccaac
ggcgaggccctcaccgtcgaggacctgctgcccatcaacacctctcgcatcccgcgcccg
cgcccccctaccctgacgtccatccccgccctgctcgccaccttccagaacgagtgggat
aaccttgcgctggagacatacaacctgcgggagcagctggcccggacaagggaggagctc
gcgacggcgctgtaccagcacgatgccgccgttcgcgtcattgcgcggttgaccaaggag
cgagacgaggccagagactcgctgagcaagattaccgtaacagacggcgctgccaacggc
gacggcatggtggtggacagcgtcgaggcgctgccggaagacctggcggcgcaagtggat
tcagtacatcagagcttatcaaaggggcgcaagaagcgctccgtgcccgagggctgggtc
tccagcgaccaggtgtcatcattcgagacgacgacgacaaacgccctgccggttccccgg
gccaccgctctcgacgtggagggcagttatgcggtagcgggaggattgaacggggaggca
gccatctactccgtcgaggccgacaacgtggagagaacgattccggtgggcgagcccgtg
acggatacgctctgggctggctccaaggtcttcttcgccactagccaaggcaacgtcaag
gtgtacgaggccggtaacgaggttggcacattatccgagcacgctgggcctgccagcggc
ctgagcctacacccgtccggagatttgctcgcctccgtgggcaccgacaagagcatcgtg
ttttaccacctggagacgatgaagcgggtcagccgggcctatgccgatgcttctctgaca
acgtgcgctttccaccccgacggacatctttttgccgcaggcacagtcaccggcgacatc
aagctgtacatgaccaagaaccttgagcaggccgttgtgttcaagctgggcgcccccgtg
caggccctggtcttttccgagaacggcttcatgctggcggccacggccaaggggcagacg
agcgtcaccattttcgatctgcgcaaagaaggcgacgctgccgtgtccaaggtgctggag
actggagggtcggtgcagtcactggcctgggactacaccggtcagttcctggcgacggga
ggcgccacgggcatcacggtgcagcagtacaccaagtcgagcaagaagtggagcgagcct
ctgcgcaactcggtcgcagccgtcgcggttcgatggggcgagtcggggcagaagctgatt
tcactcaacggggagggagtggtgacggtgttgggcgtcaaggagtga

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