Trichoderma reesei QM6a: TRIREDRAFT_105938
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Entry
TRIREDRAFT_105938 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIREDRAFT_105938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_105938
Spliceosome [BR:
tre03041
]
Complex B
Other components
Prp19-related factors
TRIREDRAFT_105938
Complex C
TRIREDRAFT_105938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_YTH1
RRM_occluded
Nup35_RRM_2
RRM_3
ATP_bind_3
Motif
Other DBs
NCBI-GeneID:
18481146
NCBI-ProteinID:
XP_006964284
JGI:
Trire2_105938
UniProt:
G0RFQ2
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MPPQIKQDLNRSGWETTDFPSVCENCLPENPYVKMLKEDYGAECKLCTRPFTVFSWAAER
AQGRKRRTNVCLTCARLKNCCQSCMLDLSFGLPINVRDTALKMIAPGPTSDINREYFAQN
NEKLIEEGKAGTEEYEKTDDKARELLRRLANSKPYFRKGRTVDESELAGARAGGNPAVGA
GVGGPGPIRTRDSRAAAAAGARPGGRGRGRPAFPSAAQLPPSPKDWLPPDDPNIMSLFVT
GVEDDLPEHKIRDFFKVHGKIKSLVCSHMSHCAFVNYETREAAEKAAAACQGRAVIAGCP
LRIRWGQPKAIGTMDREQRYQMLQDARIRQNRPQQQRALEAGQQPTAATRAVAAAPPPGA
EDTPNYASLAGE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccagatcaagcaagacctcaaccggtcaggatgggagacgaccgactttccc
tccgtctgcgaaaactgcctgcccgagaacccatacgtcaagatgctcaaggaagactac
ggcgccgagtgcaaattgtgtacgcgaccgtttaccgtcttcagctgggctgctgagcgc
gcacagggccgcaagagacggaccaatgtgtgcctgacgtgcgctcgcctcaagaactgc
tgccagagctgcatgctggatctcagcttcgggctgcccatcaacgtccgcgataccgca
ctcaagatgattgccccaggcccgacgtccgacatcaaccgagagtactttgcgcagaac
aacgagaagctcattgaggagggcaaggcgggaactgaagagtacgagaagacggacgat
aaggcccgcgaacttttgcgacgccttgccaacagcaagccctactttcgcaagggcaga
accgtggacgagtcagaactggccggtgcccgagctggcgggaaccctgcagtaggggct
ggcgttggaggcccaggtccgatccgaactcgagactcgagagctgcagccgctgcaggc
gcgcggcctggcggtcgagggcgaggccggccggcattccccagcgcagcacagctgccc
ccgagcccaaaggactggctaccaccggatgaccccaacatcatgtctcttttcgtcacg
ggtgtcgaggacgacctgcccgagcacaagattcgcgacttcttcaaggtccacggcaag
atcaagagcctggtgtgctcccacatgtcccactgcgcgtttgtcaactacgagacgagg
gaggccgccgagaaggcagcggccgcatgccagggcagggcggtgattgctggatgcccg
ctgaggattcgctggggacagccaaaggccattggaaccatggaccgtgagcagcgctat
cagatgctgcaggatgcccgcatccgccagaacaggccgcagcagcagcgggccttggaa
gcgggccagcagccaaccgcggcgactcgcgcagttgctgcggcgccgcctcccggagcg
gaagacacgcctaactatgccagcctggctggagagtaa
DBGET
integrated database retrieval system