Trichoderma reesei QM6a: TRIREDRAFT_106962
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Entry
TRIREDRAFT_106962 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_106962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_106962
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_106962
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIREDRAFT_106962
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TRIREDRAFT_106962
mRNA degradation factors
5'-3' decay
Decapping complex
TRIREDRAFT_106962
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
TRIREDRAFT_106962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
18481369
NCBI-ProteinID:
XP_006965132
JGI:
Trire2_106962
UniProt:
G0RIV8
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MADRLADQLQSSHLSDGVPPRNEDWKQNLNIPAKDTRQQTEDVTKTKGLEFENFALKRDL
LMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKISKIQC
LILVPTRELAMQTSQVCKTLGKHLGVNVMVTTGGTGLRDDILRLQEPVHIVVGTPGRILD
LAGKNVADLSECPMFIMDEADKLLSVEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFS
DKNMTSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHARMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPASIDKSL
YVYENPESIPRPISNVPKGALPPSQSFPAQVPALTQTAHNQHQQPQQAQGNWQPQNGQQN
ANSQYNNGSRGRGGRGRGYRGRGGGNNNASNGGGRGRGQPPRDPPS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgactagcagaccaattgcaatcctcccacctgagcgatggcgttcctccg
cgaaatgaagactggaaacaaaacctcaacattcccgccaaggataccagacaacagacg
gaggatgttacaaagaccaagggtctcgagttcgagaactttgccttgaaacgagacctg
ctcatgggaatcttcgaggcagggttcgaaaagccgtcacccatccaggaagaagccatc
ccggtagcattaacgggtcgggacattttggctagagccaagaacggcacgggcaagacc
gcagcttttgtcatccctgccctcgaacgcatcaaccctaaaatctcaaagatccaatgc
ctcatcctcgtccccacacgcgagctggcgatgcagacgtcacaagtctgcaagacgttg
ggcaagcacctcggcgtcaacgtcatggtcacaactggtggtactggccttcgagatgac
attctccgtcttcaggagcccgtccatatcgtggtcggcactcccggcagaattctcgat
ctcgcaggaaagaacgttgccgatcttagcgaatgccccatgttcatcatggacgaggcc
gacaagctcctctccgtcgagttcacgcccgtcattgagcagttgctccaattccacccc
aaggaccgacaggtcatgctcttctccgccaccttccccctctcggtcaaggacttttcc
gacaagaacatgaccagcccttacgaaatcaacctcatggacgaactcaccctgcggggt
atcacccaatactacgcctttgtcgaagaaaagcagaaggtccactgcttgaacacgctc
ttctccaagctgcagatcaaccagtccatcatcttttgcaactcgaccaaccgggtcgag
ctgctggccaagaagattacagaactcggctactcatgcttttacagccatgctaggatg
cagcagcatgcccgaaatcgcgtcttccacgacttccgcaacggcgtctgccggaatctc
gtctgctcagatcttctcacccgaggcattgacatccaggccgtcaacgttgtcatcaac
tttgacttccccaagaatgccgaaacctatctccaccgaatcggtcggtctggtcgattt
ggtcaccttggtctggccatcaatctgatcaactgggacgaccgcttcaacctctacaac
atcgaaagggatctcggcaccgagattcagcccatccccgcgagcatcgacaagagcctc
tacgtctacgaaaaccctgaatcgattcctcggcccatctccaatgttcccaagggtgct
ttgcctccatcgcagtcgttcccggcccaggtccccgccctaacccagacagctcataat
cagcatcagcagccgcagcaggcccaaggaaactggcagcctcagaatggtcagcagaat
gctaactcccaatacaacaacggaagccggggccgaggcggccgtggccgtggataccgg
ggccgtggagggggcaacaacaacgccagcaacggtggtggtcgaggccgtggccagcca
ccgcgggatcccccctcttag
DBGET
integrated database retrieval system
