Trichoderma reesei QM6a: TRIREDRAFT_107385
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Entry
TRIREDRAFT_107385 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIREDRAFT_107385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_107385
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_107385
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIREDRAFT_107385
Spliceosome [BR:
tre03041
]
Complex A
U2 snRNP components
U2 related factors
TRIREDRAFT_107385
Complex B
TRIREDRAFT_107385
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TRIREDRAFT_107385
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
90S particles
Helicases
TRIREDRAFT_107385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
Flavi_DEAD
Response_reg
NB-ARC
Motif
Other DBs
NCBI-GeneID:
18481460
NCBI-ProteinID:
XP_006965340
JGI:
Trire2_107385
UniProt:
G0RJI0
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MDGKPNPYLAHMYEEENGWGSSASEPSPNSPLAGMKRRQTTAQQAAKAEDSDSNPFTGRP
HSQKYFQILQTRRELPVHKQRQEFLDKYHSTQILVFVGETGSGKTTQIPQYVVYDELPHL
TGKLIACTQPRRVAAMSVAQRVADEMDVSLGEEVGYSIRFEDRTSPKTMLKYMTDGMLLR
EAMHDHEMSRYSCIILDEAHERTLATDILMALLKQIAERRPDLKIIIMSATLDAQKFQKY
FNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIRTVLQIHASEPEGDILLFLTGEDEIED
ACRKIGLEAEELIREVDAGPLAIYPLYGTLPPHQQQRIFDKAPPPLRKGGKPGRKCIVST
NIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKC
FRLYTEKAFKKELIEQTYPEILRSNLANTVLELKKLGVEDLVHFDLMDPPAPETMMRALE
ELNYLACLDDDGELTTLGSLASEFPLDPALAVMLISSPEFYCSNEILSITSLLSVPQIFV
RPASSRKRADEMKALFSHPDGDHLTLLNAYHAFKGQDTADPNSVKQWCHEHFLSYRHLSS
ADSVRAQLKRIMETHGLELVSTPFEDKNYYTNIRRAMLAGFFMQVAMKESSGKVYRTVKD
EQAVLIHPSTVLRTDFDWVMYNEFVLTSKQYIRTCTGIRPEWLLEIAPVYYDLDTFEDGE
IKRSLARAAEKKRRKEAMKKGGR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaagcccaatccctacctcgcccacatgtacgaggaggagaacggctggggc
tcgtcggccagcgagccgtcgcccaactcgcccttggccggcatgaagcgtcgccagacc
actgcccagcaggccgccaaggccgaagactccgattcgaatcccttcacgggccgtccg
cactcgcagaagtacttccagatcctgcagacgcggcgagaactccccgtccacaagcaa
aggcaagagttcctcgacaagtaccactcgacccagatcctcgtcttcgtcggtgagacc
ggttccggaaagacgacccagatcccccagtacgtcgtgtacgacgagctgccgcacctc
acgggcaagctcatcgcctgtacgcagccccgtcgagtcgccgccatgtcggtagcccag
cgtgtggccgacgagatggacgtcagcctcggcgaggaagtcggttacagcatccgtttc
gaagacaggacgtcgcccaagaccatgctcaagtacatgacggacggtatgctcctgcgc
gaggccatgcacgaccacgagatgtcgcgatacagctgcatcattctcgacgaagcgcac
gagagaacgctcgcgacggacattctcatggctctcctgaagcagatcgccgagaggcgc
cccgatctcaagatcatcatcatgtctgccacgctcgacgcccaaaagttccaaaagtac
ttcaacgacgcgcccctgctggccgtccccggacgaacgcaccccgtcgagatcttctac
acccccgagcccgagcgggactacgtcgaggccgccatccggacggttctccagatccac
gcctccgaacccgaaggcgacatcctgctcttcctcaccggtgaagacgagatcgaagac
gcctgccgaaagatcggccttgaggccgaggagctgatacgggaggtggatgccggcccc
ttggccatctaccctctgtacggcacgctgccgcctcaccagcagcagcgcatctttgac
aaggcaccgcctccgctcaggaagggcggaaagcccggccggaaatgcatcgtctcgacc
aacattgccgaaaccagtttgaccattgacggtatcgtctacgtcgtcgaccccggcttc
agcaagcaaaagatctacaaccccaggatccgagtcgagtctctgcttgtctcgcccatc
tcaaaggcgtcagcgcagcagcgtgccggtcgtgccggtcgtacgaagcctggtaaatgc
tttagactctacaccgagaaggcgttcaagaaggagctcatcgagcagacgtaccccgag
attctgcggtccaacctcgccaacacggtgctggagctgaagaagctcggcgtcgaggac
ctcgtccactttgatctcatggaccctcctgctccggagaccatgatgcgtgcgctggaa
gagctcaactaccttgcctgccttgacgacgacggcgagctgactacgcttggcagcctg
gcatccgagtttcccctggatcccgccctggccgtcatgctcatctcctcgcccgagttc
tactgctcgaacgagatcctctccatcacctctctcctgtccgtccctcagatcttcgtg
cggcccgccagcagccgtaagcgagcggacgagatgaaggccctcttctcccaccccgac
ggcgaccacttgaccctcctcaacgcctaccacgccttcaagggccaggacacggcggac
cccaactccgtgaagcagtggtgccacgagcacttcctgtcctaccgccacctctccagc
gccgacagcgtccgcgcccagctcaagcgcatcatggagacgcacggtctggaactcgtc
tcgacccccttcgaggacaagaactactacacaaacatccgcagggccatgttggccggc
ttcttcatgcaggtcgccatgaaggagagctccggcaaagtctaccgcactgtgaaggac
gagcaggccgtcctgatccacccgtcgaccgtgctgcgcaccgacttcgactgggtcatg
tacaacgagttcgttcttacgtctaagcagtacatccgcacatgcacaggcatcaggccc
gagtggctattggaaatcgctcccgtgtactatgacctcgacaccttcgaggacggagag
attaagcggtcattggcccgagccgcagagaagaagaggagaaaggaggccatgaaaaag
ggtggtcggtga
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integrated database retrieval system
