Trichoderma reesei QM6a: TRIREDRAFT_120753
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Entry
TRIREDRAFT_120753 CDS
T02991
Name
(RefSeq) Rad3 protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03022
Basal transcription factors
tre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRIREDRAFT_120753
09124 Replication and repair
03420 Nucleotide excision repair
TRIREDRAFT_120753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_120753
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_120753
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRIREDRAFT_120753
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRIREDRAFT_120753
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRIREDRAFT_120753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
18482950
NCBI-ProteinID:
XP_006963440
JGI:
Trire2_120753
UniProt:
G0RD61
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MPPKRKAGTSATQGGVKAGRSSRISTPGGTTPRSIDSGDEVAEDDDAPVDEELEQEIDKN
IDRFSLGRYQKKHHIREPLPHIFGNNDFSYLELKKDHRNRPLWIDPQKGRIILESFNPLA
EQAQDFLITIAEPLSRPTFMHEYALTTHSLYAAVSVGLSPKDIINTLDRFLKTPLPEEIQ
SFIESCTQSYGKVKLVLKNTKYYVESPDPNMLQMLLKNPKIGPLRVQGTEEITTSAAPKL
GSLVIPGTKNAAGAKQANGLQPANGDPSSDGQSALPASEIGPRLGEEDDDDQEVTHAFEI
ADKDVETVQKECLNLGFPVLEEYDFRRDEVNATLDIDLKPGTQIRPYQEKSLSKMFGNGR
AKSGLIVLPCGAGKTLVGITAACTIKKGVIVLCTSSMSVVQWRNEFLKWSNINPDDIVAF
TSDSKNSVFTGSTGIIVTTYSMVTQSRARSYDAEKMMKFLTGREWGLMLLDEVHVVPANI
FRKVTSSIKTHSKLGLTATLLREDDKISDLNFLIGPKLFEANWMELSKQGHIARVQCAEV
WCPMPTEFYDEYLRAPSRKKNLLYIMNPRKFQACQYLINYHESRGDKIIVFSDNVYALKA
YALKLGKAFIYGGTGQAERLQVLENFQHNPQVNTLFLSKIGDTSLDLPEATCLIQISSHY
GSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYFSSKRQAFLVDQGYAFKVIT
QLANIEKTPGLAFATAAERRELLQKVLVENETMDDEDITDDLFHSGTMGRKKKKGAARRT
AGTLGELSGGQDMAYIEQNKKMNVKKGKKESSAFFKKIGRENARRAALG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaagcgaaaagcaggcaccagcgccacgcagggaggagtcaaggctggccgg
tcctcgcgcatatcgacgccagggggcacgactccccgcagcattgacagtggcgatgaa
gtggcggaagacgacgacgcgcccgtcgacgaggagctggagcaggaaatcgacaagaac
atagatcgcttctcgctggggcgatatcagaagaagcaccacatccgggagccgctcccg
cacatctttggcaacaacgacttctcgtacctcgagctcaagaaggaccacaggaaccgt
ccactctggatcgatcctcagaaggggagaatcatcttggagagcttcaatccgctggcg
gagcaggcgcaagacttcctcatcaccattgccgaacccctgtctcggccgacgtttatg
catgaatatgccctcaccacgcacagtctctatgccgcggtctctgtcggtctgtcgccc
aaggacatcatcaacactcttgaccgctttctcaagacgccgctgccggaggagattcag
tccttcattgagagctgcacccagagctacggcaaggtcaagctcgtcttgaagaacacc
aagtactacgtcgagagcccggatcccaacatgctgcagatgctgctcaagaatcccaag
attggccctctccgcgttcaaggaacggaagaaattactacgtcagccgcgcccaagctc
ggcagcctcgtcatccccggtacgaagaatgctgcaggagccaagcaggcgaatggactg
cagccagccaacggcgacccgtcgagcgatggccagtcagccctgccggcaagtgaaata
gggcctcgcctcggcgaggaggatgacgacgatcaagaggtgacgcacgcctttgagatt
gccgataaagacgttgagacggtgcagaaggaatgtctcaacctcggatttccggtcctc
gaagagtacgacttccgccgggatgaagttaatgcgacgctggatattgatcttaagcct
ggtactcagatccgtccatatcaggagaagagcctgagcaagatgtttggaaacggacgt
gccaagagcggcctgatcgtgctgccctgcggcgctggaaagacgctggtcggcattacc
gcagcgtgcacgatcaagaagggtgtcattgtgctgtgcacgagttccatgtccgtggtg
caatggcgaaacgagttcctgaagtggtccaacatcaacccggacgatattgtcgccttc
acgtcggactcaaaaaacagcgtcttcacgggaagcaccggcatcatcgtcaccacctac
tccatggtcacccagtccagggccagatcgtacgatgccgagaagatgatgaagttcctc
accgggagagaatggggtctgatgcttctggacgaggtgcacgtcgtgcccgccaacatt
ttccgaaaggtcacctcctccatcaagacgcattccaagctgggcttgacagccacgctg
ctgagagaggacgacaagatctctgatctgaactttctcattgggccaaagctctttgag
gccaattggatggagctgtccaagcagggccacatcgcccgcgttcagtgcgccgaggtt
tggtgccccatgcccaccgagttctacgacgagtatcttcgggcgccatcgcgcaagaag
aatctcctctacatcatgaacccgcgcaagtttcaggcttgtcaatacttgattaactat
cacgagtccagaggcgacaaaatcattgtcttctcagacaacgtgtacgctctgaaagca
tatgcgttgaagctgggtaaggccttcatctacggcggaaccggccaggcggaacgcttg
caagtgttggaaaactttcaacacaacccccaggtcaacaccctgttcctgtccaagatc
ggagacacgtcgttggacttgcccgaggccacttgcttgatccaaatctcgtcacattac
ggttcccgacgtcaagaggcgcaaagactaggccgcattcttcgagccaagcgcagaaat
gacgagggcttcaacgcgtttttctactcgctcgtctccaaagacactcaggaaatgtat
ttttcgtcgaagcgccaggccttcttggtcgatcagggctacgccttcaaggtcatcacc
cagctggcaaacattgagaagacgccaggcctggcctttgcgaccgctgccgagcgccgc
gagctgctgcagaaggtgctggtcgagaacgagacgatggacgatgaagacattacggac
gacttattccacagcggaacaatgggccgcaagaagaagaagggagctgcccgccgcacg
gcaggcactttgggcgagctcagcggcggccaagacatggcttacattgagcaaaacaag
aagatgaatgtgaagaaggggaagaaggagagcagtgcgttcttcaagaagattgggcga
gagaatgccaggcgcgccgccttgggttag
DBGET
integrated database retrieval system
