Trichoderma reesei QM6a: TRIREDRAFT_121966
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Entry
TRIREDRAFT_121966 CDS
T02991
Name
(RefSeq) vesicle coatomer complex, alpha subunit
KO
K05236
coatomer subunit alpha
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tre04131
]
TRIREDRAFT_121966
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tre04147
]
TRIREDRAFT_121966
Membrane trafficking [BR:
tre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
TRIREDRAFT_121966
Exosome [BR:
tre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TRIREDRAFT_121966
Exosomal proteins of bladder cancer cells
TRIREDRAFT_121966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
TPR_COPA_B
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
TPR_IFT80_172
Beta-prop_ACSF4
TPR_ZFYVE26
Motif
Other DBs
NCBI-GeneID:
18483286
NCBI-ProteinID:
XP_006965599
JGI:
Trire2_121966
UniProt:
G0RKM5
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MQSSPGMLTKFESKSSRAKGIAFHPKRPWILVALHSSTIQLWDYRMGTLIDRFEEHDGPV
RGVDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVFFHHELPWILSASDD
QTIRIWNWQNRSLICTMTGHNHYAMCAQFHPKEDLVVSASLDQSVRVWDISGLRKKHSAP
TSMSYEDQIARANQNQTDMFGNTDAVVKFVLEGHDRGVNWVAFHPTMPLIVSAGDDRLVK
LWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSAGEDKTIRVWDLNKRTAVQSFKRE
NDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAVHQNTLFYITKEKHVKSYDFQKD
VESPTLLSLKKLGSPWVTPRTLSYNPAERSILVTTPNDGGSYELVNLPRDGSGAIEPSES
KRGSGNSAIFVARNRFAVLNVANQTIDIKDLSNNTARSFKPPAGTTDIYFGGTGNLLIIT
PTTVYLYDIQQKKTTAELSINGVKYIVWSNDGLYAALLSKHNVTIVTKTLEQISTLHETI
RIKSATWDDAGILLYSTLNHVKYALLNGDNGIVRTLDQTVYLVRVKGRNVYCLDRAAKPR
ILRIDPTEYRFKMALVKRNYEEMLHIIRTSSLVGQSIISYLQKKGYPEIALQFVQDPTTR
FDLAIECGNLEVAVEMAKELDKPKFWTRLATEALSHGNHQIVEMCYQKLKQFDKLSFLYL
TTGDHSKLARMAKIAEHRGDFTARFQNALYLGDVEDRIQMLKEIDLYPLAYTTAKSHGLE
EECEAILEASGLTEEQLTMPALGKPLVPPKPVVSTFKSNWPTKASSQSYFESALLGQVEG
LSLEDEPSAANGVDAEHAAKDEPAENLIAIAGEDDDDAAGWDMGDDDVPEIENDFVNVDS
AEAGGAGSCEADAWARNSPLAVDHIAGGSFESAMQLLNRQVGAVEFGPLKPRFLEVYRSS
KTFLPALANLPPLVNYVRRTIDETDLRKVLPIIPRDLEHLASNDLQKGYDSMKANKLEDG
VKIFQGILHAILVNAVSSESEVSEAKKLLASAREYTIAMNIELARRNLGSADEVAQDPAK
LKKSLELAAYFTIPKIEVPHRQIALLSAIKVAIKSKNYNSALGFANRIIANGGSSKIVEN
AKKTKAQCERNPTDSIEIEFDQFAEFEICAASHTPIYSGAPYEECAFDGSKYHSSYKGSV
CRVCGVCEIGKHGSGLRLFS
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctccccaggaatgttgaccaagtttgagtcgaagtcgtccagggccaaagga
atcgcgttccatccgaaaagaccatggattctcgtcgcccttcactcctccacaatccag
ctctgggattaccgcatgggcacgttgatcgatcgattcgaggagcatgatggtccggtc
cgcggcgtcgactttcacaagacacagccgctctttgtatccggtggcgacgattacaag
atcaaagtctggtcgtaccagacccggcgatgtctcttcacactcaacggccatctcgat
tacgtgcgaaccgtcttcttccaccacgagcttccatggattctgtccgcctccgatgac
cagaccatccgaatctggaactggcagaaccgtagcttgatttgcaccatgaccggccat
aaccactatgccatgtgcgcccaattccaccccaaggaagatctcgtggtctcggcctcg
cttgatcagtcagttcgtgtctgggacatctccgggcttcggaagaagcactccgcaccg
acttccatgagctacgaggaccaaatcgcgcgtgcgaaccaaaatcaaacggacatgttc
ggcaacaccgatgccgtcgtcaaattcgtcctggaaggccacgaccgtggagtcaactgg
gtagctttccatcctaccatgcccctgatcgtttcggccggcgacgatcgcctagtcaag
ctctggcgcatgagtgaaaccaaggcctgggaagtcgacacgtgccgcgggcacttccag
aacgcctcaggctgtctgttccacccccatcaggacctgattctgtccgccggagaggat
aagacgatacgtgtctgggacctcaacaagaggactgctgtgcaatccttcaagagggag
aacgaccgcttctgggttattgcggctcaccccgagatcaacctgttcgcagccggccat
gacaatggtgtcatggttttcaagctggaacgcgagcgccctgcctcggcagtccaccag
aacactctcttctacatcaccaaagagaagcacgtcaagtcctacgatttccaaaaggat
gtggagagcccgacgctgctgtcgctcaagaagcttggaagcccctgggttactcctcgg
accctgtcttacaatcccgctgagaggtctatcctcgtaaccacccctaacgatggtggt
tcttacgaattggtcaaccttcccagagatggctctggcgctattgagccgtcagagtcc
aagcgcgggtcgggcaactccgccatctttgtcgccagaaaccgcttcgctgtcctcaac
gttgccaaccagacgattgatatcaaggatctgtcaaacaacacagctcgttcgttcaag
cctccggccgggactactgatatctactttggaggcacgggcaatcttctcatcatcaca
cccacgactgtctatctgtacgatatccagcagaagaagactaccgcagagctttccatc
aacggcgtcaagtacattgtgtggtccaacgacggcctttacgccgccttgttgagcaaa
cacaacgtgaccattgtcacaaagacactcgagcaaatcagcactctgcacgagactatt
cgcatcaagagtgccacttgggatgatgcgggcattcttctctactcgaccctgaaccat
gtcaagtatgctttgctcaatggcgacaatggtatcgttcggactcttgatcagaccgtc
tacctcgtgcgcgtcaagggccgcaacgtctattgcttggatagagcagcgaagcctcgc
attctgcgcatcgacccgacggagtatcgcttcaagatggccttggtcaagcgaaactac
gaagaaatgcttcacatcatccgcacttccagccttgttggccaatccatcatttcttac
ctccagaagaagggttaccccgagattgcgctgcagtttgtccaggacccgacaactcga
ttcgatctggcaattgaatgcggcaatctggaagttgctgtggagatggccaaggaactg
gacaagcccaagttctggactcgactggctactgaagcactttcccacggcaaccaccag
attgtggagatgtgctaccagaagctgaagcagttcgacaagctgtcgttcctctatttg
acaacaggcgaccactcgaagcttgctcgaatggccaagatcgcagagcatcgtggagac
tttaccgcgcgattccagaacgccctgtaccttggcgatgtcgaggaccgcattcagatg
ctgaaggagattgatctctatccccttgcgtatactacggccaaatcccacgggctggag
gaagaatgcgaagctatcctcgaggcctctggtctcacagaagagcagctaaccatgcct
gcgttgggcaagccgttggtgccaccgaagcccgtggtgtcgaccttcaagagcaactgg
cccaccaaggctagctcacagtcttactttgagagcgctctgcttggccaggttgaaggc
ttgtcactggaggatgagccaagtgctgccaacggcgtcgacgccgagcatgccgcaaag
gacgaaccggcagagaatctcattgctatcgctggcgaagacgatgacgatgcagcaggc
tgggatatgggtgatgacgatgtccctgagatcgagaacgactttgtgaatgtcgacagt
gcggaagccggcggtgctggaagctgtgaggctgatgcctgggcacgaaactcacctctg
gctgttgaccacattgctggcggctcatttgaatcagctatgcagctcttgaatcgccag
gtgggcgcagtcgaattcggccccctgaagccccgattcttggaggtctatcgatcttcc
aagactttccttccggcgttggccaacctgcctcccttggtcaattacgttcgccgtact
attgatgaaacggacctacgaaaggttttgcccattatcccgcgcgatcttgagcatttg
gcctcgaatgatctgcaaaagggctacgattcgatgaaggcgaacaagctggaagacggc
gtcaagatcttccagggtatcctgcatgctatcttggtcaacgccgtctccagcgaaagc
gaagtgtcggaagccaagaagctgcttgcttcagcaagggaatacaccattgcgatgaac
attgagcttgccaggagaaaccttggctcggccgatgaggtcgcccaagaccccgcgaaa
ctgaagaagagcttagaacttgctgcttacttcaccattcccaagattgaggtgcctcac
aggcagattgcactgctaagcgctatcaaagtggcaattaagagcaagaactataattct
gctttgggcttcgcgaaccgcatcatcgcgaatggaggttcgagcaaaatcgtcgagaac
gccaagaagacgaaagctcaatgcgagagaaacccgaccgacagcatcgagattgaattt
gaccagtttgcagaatttgaaatttgtgccgccagccatactcccatctacagcggagcc
ccatacgaagagtgtgcctttgatggctcaaagtatcactcgagctacaagggatctgtt
tgtagggtgtgcggagtttgcgagattggtaagcacggtagcggcttgagattgttttca
tag
DBGET
integrated database retrieval system
