Trichoderma reesei QM6a: TRIREDRAFT_123860
Help
Entry
TRIREDRAFT_123860 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_123860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_123860
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIREDRAFT_123860
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRIREDRAFT_123860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
ZNF380_CC
Motif
Other DBs
NCBI-GeneID:
18483751
NCBI-ProteinID:
XP_006968986
JGI:
Trire2_123860
UniProt:
G0RUX1
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MAARKLQQEVDKCFKKVAEGVAEFEAIYEKIEQSNNPAQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRKLIETQMEKFKAVEKAMKTKAYSKVGLEAAAKLDPKEQAK
VEACEFLSSMVDELELQIETLEAENESIQATLKKGKNKTAQENRMAEIDQIIERHKWHQG
KLELIRRTLENGGIDTEQVNALEEQIRYYVSDGMNEDYMDDDEIYDELDLEEEEGVFGMN
QDTEKNSSQDTQSIQDDVHEIEPPSKARKAAKDTDSTTSSTTRAKSAQSKSPLPALATLH
TPLSTIGAGGSGSPAMKPASIPTRPAGEGLKYASAAAAAAASDKNNVGIAPLPPPPGINV
GISPLPPAQSRTSATNSPAVSFVQPAQASSSQPSEPKQSAPAPAPVPAPAPVANENAEPP
STKSTKKSKASGKQPATSEASSSESQNAPPQTNGPPNGSTNGVKPVAEEAEEESIYHLPA
SLQDLVDSYETARKRPYQPLSQSTLNLLRASAQNYPSAFEADVPRTYRPDMPVPQTGSGF
PTQPLPIFDDPRLYSRIDPDTLFYVFYYKQGTAQQYLAAKALKDQSWRFHKQYQTWFQRH
EEPKNITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggaaactacaacaagaagtcgacaagtgcttcaaaaaggtggcggaaggc
gtcgccgagttcgaggccatctacgagaagatcgagcagtcaaataacccggcccagaag
gagaagctggaagacaacctcaagcgcgagatcaagaagctgcagagactgcgcgatcag
atcaagacatgggctgccagcaacgacatcaaggacaaggctcccttattggagcaccga
aagctgattgagactcaaatggaaaagttcaaggccgtggaaaaggccatgaagaccaag
gcgtattccaaagtgggactcgaagccgccgcgaaactggatcctaaagaacaggccaag
gtcgaggcctgcgaattcctcagcagcatggtcgacgagctggagcttcagatcgagacc
ctcgaggccgagaacgaatccatacaagccaccctgaagaagggcaagaacaagactgcc
caggaaaaccgcatggctgagattgatcagatcatcgagaggcataaatggcatcaaggc
aagctggagctgattcgaagaacactggaaaatggcggcatcgacacggagcaggtcaac
gccttggaggagcagattcgctactatgtgtctgacggcatgaacgaggactacatggac
gacgacgagatctacgacgagctcgacctggaagaagaggaaggcgtctttggaatgaac
caggataccgagaagaattcatcccaggatacgcagtccatacaggatgacgtccacgag
atcgaaccgccatccaaggcgaggaaagccgccaaggataccgattccacaacgtcgtcg
acgacacgggcaaagtccgcgcagtccaagtctcccctaccggcgctggccacgctccat
actccgctgtctacgataggggctgggggcagcggcagccctgccatgaagcctgcgtcg
atccccacgaggccggcaggggagggcctcaagtatgcgtctgccgctgccgccgccgcc
gccagcgacaagaacaatgttggcatcgctcctctacccccgccaccgggtatcaacgtt
ggcatatcgccgctaccgcctgcgcagtcgagaacaagcgccaccaactctcccgccgtc
tcgttcgtacagcccgcccaggcctcgtcgtcacaaccctccgaacccaagcaatctgcg
cccgcacctgctcccgtgcccgcacccgcacccgtcgccaacgagaacgctgagcctccg
agtacgaagtcgacgaagaagtccaaggcttcggggaagcagccggctacctcggaggca
tcatcatccgagtctcaaaacgcccctcctcaaaccaacggacctcctaatggatctacg
aacggtgtcaagcccgttgcggaagaagccgaagaggaatccatctaccatcttcctgcg
tcattacaagacctcgtcgactcctacgagacggcgcggaaacggccataccagcccctg
tcacagtccacgctcaacctcctgagggcgagcgcacaaaactatccgagcgcgttcgag
gctgatgttccacggacgtatcgtccggacatgccggttcctcaaaccggttccgggttt
cccacccagccactgcccatattcgacgatccgcggctttactcgaggattgacccggat
acgctcttctacgtgttctactacaagcaaggaacggcgcagcaatacttggcggccaag
gcgctgaaagaccagagttggcggtttcataagcagtaccagacctggttccagcgacat
gaggagcccaagaatatcaccgaagaatttgagcagggcacgtaccggttcttcgactac
gaaagcacttggatgaaccgaagaaaggcagacttcaagtttgcttacaagtttctcgag
gatgacatctag
DBGET
integrated database retrieval system
