Trichoderma reesei QM6a: TRIREDRAFT_2087
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Entry
TRIREDRAFT_2087 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_2087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_2087
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRIREDRAFT_2087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18483922
NCBI-ProteinID:
XP_006960951
JGI:
Trire2_2087
UniProt:
G0R6Y3
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MAAEAGLSRSTFAKLSPHPYLLANLEPSSDSAAPTRSNGRAPFEVRKPTVNLSSLSHAHG
SALVRTGDTTVICGIRGETILTEHIPNYRASNIQTELSDYDLLVPNIELATGSAPQFLPG
GPPTTLAQTLSTRIYSLLHSSKLLRAEDLRIWHKRAADVPVPADEEEVMEESDGEKYVAA
YWVLYIDIFFISFDGNPFDAAWAATVAALRDTKLPQARYDPDREMILCSRKDPRPLTVAS
IPIACTAVIFTGKETKDQAPDGKFWLLADPDTLEESLCNETVTIVVDCAGGSRRILSISK
HGGTAMTAKLLGSKDFLDWASKRWEDFASAITGTRL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaagcgggcctttctcgctctacctttgccaagctctctcctcatccatat
ctcctcgcaaacctcgaaccctccagcgactctgctgcgccgacacgaagcaatggccga
gcaccgttcgaagtccgaaaaccgacggtgaacctgtcaagtctctcacacgcccacgga
agcgctctggtgcgcacgggagacaccaccgtcatctgcggcatccggggcgaaaccatc
ctgacggagcacatccccaactatcgcgcatccaacatacagacagaactatccgactac
gacctactggttccaaatatcgagttggccactgggtccgcaccacagttcttacccggc
ggtccgcccacgacgctcgctcaaacgctgagcaccagaatctactctctcctacacagc
tccaagctgctgcgcgccgaggacttgcggatatggcataaacgagcggccgacgttccg
gttccagctgatgaagaggaggttatggaggaaagtgatggggagaaatacgtggccgcc
tactgggtgctttatatcgacatcttcttcatctcctttgacggcaacccgtttgatgcg
gcttgggctgctacggtggccgctctgcgcgacaccaagctgccgcaagctcgctacgac
cccgaccgagagatgatcttgtgctccaggaaagaccccagacctctcacggtggcaagc
ataccgattgcctgcacggcagtcatcttcacaggcaaggagacgaaagaccaggctccg
gatggcaagttctggctgctggcagacccagataccctcgaggagtcattatgcaacgag
acggtcacaattgtcgtcgactgcgcaggaggctcaagaaggatcctctccatctcaaag
cacggaggcacggccatgacggcgaagctactcgggtcgaaggactttctcgactgggcg
agtaagcggtgggaggattttgcatcagcaatcactggcacccggctttga
DBGET
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