Trichoderma reesei QM6a: TRIREDRAFT_2095
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Entry
TRIREDRAFT_2095 CDS
T02991
Name
(RefSeq) DNA polymerase delta, catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03030
DNA replication
tre03410
Base excision repair
tre03420
Nucleotide excision repair
tre03430
Mismatch repair
tre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIREDRAFT_2095
03410 Base excision repair
TRIREDRAFT_2095
03420 Nucleotide excision repair
TRIREDRAFT_2095
03430 Mismatch repair
TRIREDRAFT_2095
03440 Homologous recombination
TRIREDRAFT_2095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_2095
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_2095
Enzymes [BR:
tre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRIREDRAFT_2095
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
TRIREDRAFT_2095
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
TRIREDRAFT_2095
MMR (mismatch excision repair)
DNA polymerase delta complex
TRIREDRAFT_2095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
RNase_H_2
DNA_pol_B_exo2
DUF2614
Motif
Other DBs
NCBI-GeneID:
18483925
NCBI-ProteinID:
XP_006960954
JGI:
Trire2_2095
UniProt:
G0R6Z7
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MAATVVPQKRVLGESRTRQNIPSSPQSSKKRKTDSIAEPVPIPRFISSQKGPGAKLGASQ
TKSVFESEILEKLSQDISERKQNNTEKDQAWDRPPVTEFVPGRDSICFQSIEAEEGTLNG
GKVAVKLFGVTDEGYSVMLHVTDFKHYLYVAAPMSFQPKDCALYKAYLETQVAQHQPAIH
SVSLTMKEDIYHYQGNVQSPYLKITVTDPKFINTVRSTIEKGLANWKGMWGPLDGGLRTY
DNIQYVLRFMVDCKIQGMSWVEAPAGTYKMIPEHSKQSNCQIEAEVSYVDLIAHKPEGEW
AKMAPLRILSFDIECAGRKGIFPEANVDPVIQIANVVTKYGEKKPFIRNVFCLDTTSPIV
ATQILDFEKEEQMLHEWQQFLIRVDPDIIIGYNISNFDFPYLLDRAKHLKVQGFEYWSRI
PSKPSRVKETNFSSKQIGNRDTKATNTNGRLQLDMLQLVQRDHHLRSYTLNSVCSQFLGE
QKEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFN
FLLSRGQQIKFVSQLFRKALEQKLVIPNIAPQGSEDQYEGATVIEPTRGYYDVPIATLDF
ASLYPSIIQAHNLCYTTLLRPGDVERFKLKKDEDYIVTPNGDMFVTATKRKGLLAQILEE
LLSARKQAKRELAQETDPFKKAVLNGRQLALKVSANSVYGLTGATTGKLPCLAIASSTTS
FGRQMIEKTKREVEEKYTIANGYTHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEEASKYV
SAKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTRTEKYDKMDTKGLETVRRDNCLLAQTV
IEKVLRMILIDRDVQGAQDYVKSTIADLLQNKIDMSKLVITKALTKEDYAAKQAHVELAQ
RMKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLENNVPIDTKYYLDNQLAKP
LGRIFEPILGETKAKSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGRDESA
GAVCSDCAPRVGELYNKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMR
MKAKKDLEDAGKELSRFDADQAAIW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccgtcgtcccccagaagcgggtgctgggcgagtcccgcacccgccagaac
atcccgtcgtcgccgcagtcgagcaagaagcgcaagacggacagcatcgccgagcccgtg
ccgattccgcgcttcatcagctcgcagaagggccccggcgccaagctaggcgccagccag
acgaagagcgtctttgagtccgaaatcctcgagaagctcagccaggacatctcggagcgc
aagcagaacaacacagaaaaggaccaggcgtgggatcggccgccggtgaccgagtttgtg
ccgggccgggacagcatctgcttccagtccatcgaggctgaagagggcacgctgaatggc
ggaaaggtggccgtgaagctgtttggcgtgacggacgaggggtactcggtcatgctgcat
gtgacagacttcaagcactacctctacgtggctgcgcccatgtcctttcagccaaaggac
tgcgcgctctacaaggcatatctcgagacacaggtcgcccagcaccagcccgcgatccac
tcggtcagcttgaccatgaaggaggacatctaccactaccagggcaacgtacagagccca
tacctcaaaattaccgttaccgaccccaagttcatcaacacggtgcgatcgacgatagaa
aagggccttgcgaattggaagggcatgtgggggcccttggatggcggcttgaggacatac
gacaacattcaatacgtgctgcggttcatggtggattgcaagatccaaggcatgtcctgg
gtggaagcccctgccggtacctacaagatgatacccgagcatagcaagcagtccaactgc
cagatcgaagccgaagtcagctacgtcgatctcatcgcccacaagccggagggggaatgg
gccaagatggcgcctctgcgaattctctccttcgatatcgagtgcgccggacgcaaggga
atcttccccgaggccaacgtggaccccgtcatccagatcgcaaacgtggtcaccaagtac
ggagagaagaagccctttatccggaatgtcttttgcctagacaccaccagccctatcgtc
gccacacagattctggactttgaaaaagaggagcagatgctccacgagtggcagcagttc
cttattcgagtcgatccggacattatcatcggatacaacatttccaactttgatttccca
tacctcctggatcgcgccaagcacctcaaggtgcaaggcttcgagtactggtctcgcatt
cccagcaagccctccagggtcaaggaaaccaacttttcaagtaaacaaatcggcaatcga
gacaccaaggccacaaacaccaacggcagactgcagctcgacatgctgcagctggtccag
cgcgaccaccatctgcgaagttacacgctcaactccgtgtgctcccaattcttgggcgaa
cagaaggaagacgttcaccatactatgatcacagagctgttcaacggaacgcccgagtcg
cgacgtcgtctggcgctgtactgcttgaaagacgcctaccttccccagaggctaatggac
aagttgtcatgtttggaaaactacacggaaatggccagagtcacaggcgttcccttcaac
ttcttgctatcccgcggacaacagatcaagtttgtgagccagcttttccgaaaagcgctg
gaacagaagcttgtcattcccaacattgccccccagggttcagaggaccagtatgaaggt
gcaacagtcattgagccgacgcgaggatactacgatgtgcccattgccactcttgatttt
gcttccctgtacccgagtatcattcaagcgcacaacctttgctacacgacattgctgaga
cctggagatgttgagagattcaagctcaaaaaggacgaggactacattgttacccccaac
ggtgatatgtttgtgacggctacgaaacgcaagggactgctcgcccagattttggaagaa
ttgctgtcagccagaaaacaggcgaaacgagagctggcgcaagagacggatcccttcaag
aaggcggtgctgaacggtcggcagctggctctgaaagtcagcgccaacagtgtctacggc
ctgacgggtgcaacgactggaaagctgccgtgtctcgccatcgccagtagcacgaccagt
ttcggccgtcaaatgattgagaagacgaagcgcgaggtggaggaaaagtacaccattgca
aacggctacacgcacgatgcccaggtcatctacggcgatactgattccgtcatggtcaag
tttggaaccaaggatctcgccgaggcgatgaagctgggcgaagaagcctccaagtatgtg
tcggccaagttcctgaagcccatcaagctcgagttcgaaaaggtctacttcccgtacctc
ctcatcaacaagaagcgatatgctgggctgtactggacaaggacggagaagtacgacaag
atggacaccaagggcctggagacggtgcgacgtgacaactgcctgctggcacagaccgtg
attgaaaaagttctgcggatgattctcattgaccgggacgtccagggggcgcaagactac
gtcaagagtacaattgcagatctgctacagaacaagattgacatgtccaaactggtcatc
acaaaggccctcaccaaggaggactacgccgccaagcaagcccacgtcgagcttgcgcag
aggatgaagaagcgcgacgccggctcggcccctggcctcggtgaccgagtggcatatgtc
atggtgagaggagcggcgggagccaagaactttgaaaagtcggaggacccaatctacgtg
ctggagaacaacgtgccgatcgacaccaagtactacctggacaaccagctggcgaagcct
cttgggcgaatctttgagccgatcctgggcgagacaaaggccaagtcgctgctgacggga
gaccacacgcggaccatttcggtggcggcgccgacggtgggagggctgatgaagtttgcc
aagaagacgcagacgtgcatgggatgcaagaagcctctgacgggcagggacgagagcgcg
ggcgcggtgtgtagcgactgcgcgcctcgggtgggcgagctatacaacaagacgctggac
cgggtgtcggacctggaagtgcggttcgggcggctgtggacgcagtgccagcgatgccag
ggcagcatgcactgcgaggtgatttgcagcagcaaggactgccccatcttttacatgcgg
atgaaggcgaagaaggatctggaggatgcgggcaaggagctttcccggtttgacgcagac
caggccgccatttggtga
DBGET
integrated database retrieval system
