Trichoderma reesei QM6a: TRIREDRAFT_21557
Help
Entry
TRIREDRAFT_21557 CDS
T02991
Name
(RefSeq) chromatin remodelling factor-like protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRIREDRAFT_21557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_21557
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_21557
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TRIREDRAFT_21557
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TRIREDRAFT_21557
PBAF complex
TRIREDRAFT_21557
GBAF(ncBAF) complex
TRIREDRAFT_21557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7074
DUF3439
Motif
Other DBs
NCBI-GeneID:
18484005
NCBI-ProteinID:
XP_006961992
JGI:
Trire2_21557
UniProt:
G0RAF4
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MDDSTAFGSPGTAASPAANPALSQPPSQSNVKSQDSQDVQIDSAAPNAAGRLDEEMGDVS
EDKQGLSAGSNDAAAASNGGVETKSKEAFESAARDHLISQTHAIVLPSYSTWFDMNSIHD
IERKAMAEFFNNRNRSKTPAVYKDYRDFMINTYRLNPAEYLTMTACRRNLAGDVCAIMRV
HAFLEQWGLINYQVDADQRPSHVGPPFTGHFKIICDTPRGLQPWQPAADPVVLEGKKNRD
TEEKANASAPSKGDLNLGIGRNIYEASAKGTPITKSESQRNGDDASIEETAKAPVSKVNC
HQCGNDCTRIYYHSSQSDARAKAKFDLCPNCFTEGRLPANHSSSMYSKVENPTYTSVLDR
DAPWTDAEILRLLEGLERFDDDWGEIAEHVGTRTREECVLQFLQLDIEEKYLDSEAPTNN
PTGLSMLGSQHGHLPFSQVDNPVMSVVGFLASLADPASTAAAANRSADELKRNLRKQLDG
ANQTGNAAAGDKKENEVDKAESMDVDFRQTTVTTTTTTTTSTTKTSLASIPLASIGARGA
VFASHEEREMTRLVSAASNVMLQKLELKLKYFDEMEELLREERRELERGRQQLFLDRLAF
KRQVQAIQDTLNAAAEVGGAQGARMAQDITMDGEKLGFQPVLDGQSMLPPSSSGQVKTFE
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatgactccacggcattcggctctccgggaaccgcggcatcgccggcggccaaccct
gccctctcgcagccaccgtcgcaatccaatgtcaaaagccaagattcccaagatgttcag
attgactcggctgcacccaacgctgccggtcgtctcgatgaagagatgggcgatgtgtct
gaggacaagcaaggtctgtctgctggctcgaacgatgccgctgctgcctcaaatggcggg
gtagaaaccaagtcgaaggaggctttcgaatcagccgccagggatcatctcatctctcag
acgcatgcgattgtgctgccgagctacagcacctggttcgacatgaattctatccacgat
atcgagcgcaaagcgatggcggaattcttcaacaaccgcaatcgaagcaagactcctgct
gtctacaaagattatcgcgacttcatgatcaacacctatcgactaaacccggctgaatac
ctgacgatgacagcctgccgtcgcaatcttgccggtgatgtctgcgccatcatgcgcgtt
catgcgtttctcgaacaatggggcctgatcaactaccaggttgatgccgatcagcgaccg
tcgcatgttggcccaccgttcaccggccacttcaagattatatgtgatacaccgcgggga
cttcagccctggcaacctgccgcagatcccgtggttttggaaggcaagaagaatcgggac
accgaagaaaaggccaatgcttcagcccccagcaagggtgacctgaatctgggaattggt
cgcaacatttatgaagccagcgctaaagggacacccatcacaaagtcagaaagccagaga
aatggcgatgacgcttccatcgaagaaaccgccaaggcgccagtgtccaaggtcaactgc
caccagtgcggtaacgattgcaccaggatatactaccatagttcccagtcggacgcgagg
gcgaaggcgaagtttgatctttgccccaactgcttcaccgagggccggttgcctgcgaac
cacagctccagcatgtattccaaagtcgaaaacccgacgtacacatctgttctcgatcga
gatgcgccgtggaccgacgcagaaatcctacgcctgctcgagggccttgagcggttcgat
gacgactggggagagattgcggaacacgttggtactcgaacgagggaagaatgtgtgctg
cagttcctccagttggatatcgaagagaagtatctggattcggaggcgcctacgaacaac
cctaccggcttatccatgcttggaagtcagcacggtcatctgccttttagccaggtagac
aaccctgtcatgtctgttgttggattcctggcaagcctggcagacccagccagcactgct
gccgcggcaaacaggtcagcagatgagctcaagcgcaatctacgaaaacagctcgatggt
gcgaaccagacaggcaacgcagcggcgggagataagaaggagaacgaagtggacaaggcg
gaatctatggatgtggatttccgacagacaaccgtgaccacgactactactacaacgact
tcgactactaagacgtcgcttgcttccattcccttggcatctatcggtgctcgcggagct
gtctttgcatcccacgaggagcgggagatgacaagactggtctcggcagcctccaacgtg
atgcttcaaaagctcgagctgaagctcaagtactttgacgagatggaagagctgctgcgc
gaggagcgcagagaactggagcgaggcaggcagcagctgttcttggacagactggccttc
aagaggcaggttcaggccatccaagacacattgaatgcggcggcagaagtaggcggagca
cagggtgctcgaatggcgcaagatatcaccatggatggcgagaaactggggttccaaccc
gtattggatggtcagtcgatgctgccaccgagcagcagcggtcaggtcaagacatttgaa
gcatag
DBGET
integrated database retrieval system
