Trichoderma reesei QM6a: TRIREDRAFT_23338
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Entry
TRIREDRAFT_23338 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_23338
04121 Ubiquitin system [BR:
tre04121
]
TRIREDRAFT_23338
Enzymes [BR:
tre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TRIREDRAFT_23338
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TRIREDRAFT_23338
Ubiquitin system [BR:
tre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TRIREDRAFT_23338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
TPR_26
UBC_like
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
C1_1
zf-RING-like
zf-C3HC4
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
18484269
NCBI-ProteinID:
XP_006969175
JGI:
Trire2_23338
UniProt:
G0RVD7
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MKRSSRAPGATFGAFGAPGGTGTLSYLAEPPSFSAVSDPNVVVSLKNLLKKDSTTKTKAL
EDLLAHVQAWPHERNGGVEDALLDVWTAVYPRLSIDNARRVRELAHTLQLELIKSARRRA
ERHIPKIVGAWLAGLYDRDRGVARAASDGLSSLINTPDKVAAFWRKCQTQILDYAIDAIR
ETPDTLSDDRSTTKDDAEAKYIRVVAASLSLVLSLLQRLNDEEIAALGDKLDDFFSEEAV
WRAITFNDAAVRKTACHLLITCLNRNLPYAESTQARQAMVTGGLKTNQAGSALDYVRALT
RLSQAVPDLWTPSPKEKKPALSRLRQFIEKGSQGCPAKFWEHLDELISVLPVDQMKKLET
ASEFLEAVKAGVTNREEPRTNTSMAWKCYIDTLKRLIKNLSDDEKLVFAREQVFPLFEHS
LLTVSDKPVAIPLGPNAMGILVEAHLTLLRSPSVVVAASAEEWERLAQLLCTRISASLPE
VSREYQSSQEKIGEEGRRWFGLVGEIHRKLANIGESLPDQTAAPSRTVIDQCISILQNRN
MKPFGAAVALEYALSTAQHLFDGETGDKVADFLSTAARESAEKVIQSASSRPLLSCLNLF
GAIPSREQAYRTIWGSWVEAVLEFSDRATRNSALASLVSEEKASEPTQGNAKLQEYIISE
AIEAVKSQAPGWELLEAAMNEKGLSDESCKQLSEKLLDILDKEHALAEPALRALEIIAKG
KPQLFTEDESLHTALVAQLLSLSELSSTVISSKAVAIRAILQGEGTAGTQPVIEIIQGNL
EGAGPQSLDIETLSKQAQQAHAAGIAVEEIFPSTNAWMQKLAPFLEHPINPSLSITNSLG
GAATLANSTAQPTEIRVPRDRKGRSVPLRMSLYSAHLLKEGVDVAKLPREFQIELLYIQC
LTIQLATDQITSRDENGLWLTLDTADAVSEAESLVTTLRTSIVNQSSLASQWWDNSVDEE
QAHIFRGLVDLLKEESRELTPRGVYSARALSEIIQAVAEAHGLLPSLEETLLKPVLTKAA
PETALLAAAAISGLGETIKSSKLASNFCNRLVSDVAGASADDSKTRMILVLLSLSAQVYD
GGELPVANNRIVFAVRQITSWLEDGEPLSAPLSAEICRVLNQLLPCMSDVFGSYWEKAIE
FSLDLWEQAASYPLPDALPFIHSSLKLVKTLESLEDPNDDLQDALRESAVKRSKSLIELL
KLPRGASSQPLEIVDAMLCREVEKVSVKNLKDVSDIYELVASESQDIQTAAFDLLHRALP
AIQEQRSIDTVLDKTDARLPDELLSLLLDAPTLERYSDEMLAQFPSPIRSYLLSWKLVFD
AYSASSFKLRSDYTENLKTDNYIGPFLDFMFDVLGHSAAHPLSLEREQLTTEHFQTYDIK
IARSEPEERSMQWLLVHLFYLTLKYIPGLFKAWYLACRSKQTRIAVEAWTTKYFSPLIIS
EMLDDVQAWVDQQEPPGPDEQEVVVRISKNAREVLVGYEVDETQASIVIKVSPNYPIEAV
TVTGQEAVAVKERTWNSWIMTTQGVITFSGGSVIDGLQILKRNIVGALKGQTECAICYSV
IAADKRMPDKRCSTCKNLFHRTCLYKWFQSSSQNTCPLCRNPIDYLGSDKRRRAQRDRDE
Y
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctccagccgcgccccgggagcgacgttcggggctttcggcgctccgggcggg
acgggcaccctgtcgtacctggccgagccgccgtcgtttagcgccgtgtcggatccgaac
gtcgttgtcagcctcaagaatctgctcaagaaggacagcaccaccaagaccaaggcgctc
gaggacctgctggcccatgtccaggcgtggccgcacgagcgcaacggcggcgtcgaggat
gcgctgctggacgtctggaccgccgtctacccgcgcctcagcatcgacaacgcccgccgc
gtccgcgagctggcgcataccctgcagttggagctcatcaagtcggcgcggcggcgggcc
gagcgacacatccccaagatcgtgggtgcctggctggccgggctgtacgaccgcgaccgc
ggcgttgcgcgcgccgccagcgacggcctgtcgtcgctcatcaacacccccgacaaggtc
gccgccttctggcgcaagtgccagacgcagatcctcgactacgccatcgatgccatccga
gagacccccgacaccctcagcgatgaccggtcgacgacaaaggacgacgccgaggccaag
tacatccgcgtcgtggccgccagcttgtcgctggtgctcagcctgctgcagcggctcaac
gacgaggaaatcgccgccctgggcgacaagctggacgacttcttctccgaggaggccgtc
tggcgcgccattaccttcaacgacgctgcggtgcggaagacggcgtgccatctcctcatc
acttgcctcaatcgcaatctcccctatgccgaatccacacaggcgaggcaggccatggtc
acgggcggcctcaagaccaaccaggctgggtccgcactcgactatgtccgcgccctgacg
aggctgtcacaagctgttcctgatctttggacgccttcgccgaaagaaaagaagcccgca
ctctcacggttgcgacagtttatcgaaaagggatcgcagggctgtcccgcaaagttctgg
gagcatcttgacgagttgatatccgtcctgccggtggaccagatgaagaagctggagacg
gcctctgagttcctggaagctgtcaaagccggcgtcacgaaccgcgaagagcctcgaaca
aacacctccatggcctggaagtgctacatcgacaccctcaaacgtttgatcaagaatctt
tccgacgacgagaagctggtctttgcccgcgagcaagtgttcccactctttgaacattcg
cttctcaccgtgtccgacaagccggtggctattcccctggggcccaacgccatgggcatc
ttggtagaagcccatctcacactccttcgaagcccttcagtcgtcgttgcagcatcagca
gaggagtgggaacggttggctcagttgctgtgcaccagaatctcagcttctttgccggag
gtgtcccgcgagtaccagtcgtcacaggaaaagattggcgaggagggccgccggtggttc
ggccttgttggagaaattcaccggaagctggccaacatcggagaatccttgcctgaccag
acagccgctccatcaaggactgtcatagaccaatgcatctccattttacagaatcgcaac
atgaagccgtttggtgctgcggttgctcttgaatacgcactcagtaccgcccagcatctc
ttcgacggcgagaccggagacaaggtggcggacttcttgtctacagctgcacgagagtcg
gcggaaaaagtcatacagtctgcctctagtaggccgctgctgtcctgcctcaacctcttc
ggggcaatcccatccagggaacaagcataccgcacgatctggggctcctgggtcgaagca
gtcttggagttctccgaccgcgccactcgcaactcggctctcgcctcccttgtctccgag
gaaaaggcgtctgagcccacgcaaggaaatgccaagctccaggagtacatcatctcagaa
gcaattgaagctgtcaagagccaggcgcccgggtgggagctgctagaagctgccatgaac
gaaaaaggcctctctgatgagagctgtaaacagctatccgaaaagctattagacatctta
gacaaggaacacgcattggcagaaccggcactgagagctttagagatcatcgccaagggc
aagccacagctctttaccgaggacgagtctctccatacggctttggttgcgcagttattg
agtctgtctgaacttagcagcactgttatctcgtcaaaggccgttgcgatccgcgccatc
ctacagggagagggaactgccggcactcagccggtcattgaaatcatacaaggtaacctc
gagggagcaggccctcagtcgttggatatcgagacgctgtcaaagcaggctcaacaagca
cacgctgccggcattgccgttgaggaaatctttcccagcacgaatgcctggatgcagaag
ctggcgcctttcttggaacatccaatcaacccgtctttgtcaatcaccaacagcctgggc
ggcgccgccaccctggctaattcaacagcccagccgacggagatccgcgtgcccagagac
agaaagggtcgttcagtcccactgagaatgtctctttactctgcgcatcttctcaaagaa
ggggtagatgttgccaagcttccacgcgaattccagattgagctgctatacattcagtgc
ctcactattcagctcgctaccgaccaaatcacctcgagggacgaaaacgggctgtggctc
actttggacactgccgatgccgtgtcagaggcggaatctcttgtgacgacccttaggacc
tctatcgttaaccagagctcgctggcatcccagtggtgggacaactcggtggatgaagag
caggctcacatcttccgcgggcttgttgatctcctcaaggaggagtccagagagctgaca
cccaggggtgtttacagtgcccgggctctgagcgagatcatccaagctgtggctgaagca
cacggcctgctgcccagtctggaggagacactgctcaagccagtgctgacgaaggctgct
cccgagaccgctctcctcgctgctgccgcgatctcagggctcggtgagacaatcaaatcc
tccaaactggccagcaacttttgcaatcggctcgttagcgacgttgcgggagcctctgca
gacgatagcaaaaccaggatgattcttgtcctactttctctgtcagcgcaggtgtatgac
ggcggagagcttcccgtggccaataaccgcatcgtcttcgccgtcagacagattacgtcg
tggctggaagacggcgagccgttgagcgcgcccctctcggccgagatctgccgcgtgctg
aaccagctgctgccctgcatgagcgacgtctttggctcctactgggagaaagccatagag
ttcagtctcgacctgtgggagcaggcggccagctacccccttcccgacgcccttccgttc
atccattcctcactcaagcttgtcaaaacgctagagagcctcgaggatcccaacgatgac
ctacaagacgcacttcgagaatcagcagtcaagaggtccaagtcgctgattgagctgctg
aagctgccgcgcggcgccagtagccagcccctggaaattgttgacgccatgctttgcagg
gaagtggagaaggtgtcggtcaagaatttaaaggacgtctcggatatctacgagctggtc
gcttcggagtcgcaggacattcagacggcggcctttgatctgctgcacagggcgttgccg
gctattcaggagcagcggtccattgacactgttttggacaagactgatgctcgtctgcct
gatgagcttctgtctctgctcctcgacgccccgactctggagcggtattccgacgaaatg
ctggcgcaattcccgtctccgatccgaagctacctgctatcatggaagctcgtctttgat
gcgtactcagcgtcgtcgttcaagctgagaagcgactacacggagaacctgaagacagac
aactacatcggaccctttttagacttcatgtttgatgtgctcggccactcggcggcacat
ccgctgagcctcgagagagaacagctcacgacggagcatttccagacgtatgacatcaag
attgcccggtcggagcccgaagaacggagcatgcagtggctgctggtgcacctgttttac
ctgacgctcaagtacattcccgggctcttcaaggcgtggtacctggcctgccgctccaag
cagacgcgcatcgcggtcgaggcgtggacgacaaagtacttttcgccgctcatcatctcc
gagatgctggacgacgtgcaggcgtgggtggaccagcaggagccgcccgggcccgacgag
caggaggtggtggtgcgcatctccaagaacgcgcgcgaggtgctcgtgggctatgaggtg
gacgagacgcaggcgtccattgtgatcaaggtgtcgcccaactacccgatcgaggccgtg
acggtgacgggccaggaagccgtggccgtcaaggagcgcacgtggaacagctggatcatg
acgacgcagggcgtaatcaccttttcgggcggcagcgtcatcgacgggctgcagatcctg
aagcgcaacattgtcggcgcgctcaagggccagacggagtgcgccatctgctacagcgtc
atcgcggccgacaagcgcatgccggacaagcggtgctcgacgtgcaagaacctgttccac
cggacgtgcctgtacaagtggttccagagcagtagccagaatacgtgtccgctgtgcagg
aacccgattgattacctggggtccgataagaggaggcgtgcgcagagggatagggatgag
tattga
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integrated database retrieval system
