Trichoderma reesei QM6a: TRIREDRAFT_23452
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Entry
TRIREDRAFT_23452 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_23452
04131 Membrane trafficking [BR:
tre04131
]
TRIREDRAFT_23452
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TRIREDRAFT_23452
Membrane trafficking [BR:
tre04131
]
SNARE
SNARE associated proteins
Others
TRIREDRAFT_23452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
IGR
Motif
Other DBs
NCBI-GeneID:
18484285
NCBI-ProteinID:
XP_006969765
JGI:
Trire2_23452
UniProt:
G0RWZ9
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MLNMSGIAGNRNSTPEVNAAPSLRPPSSRAVGSGSSLRASADMAAISGTSPASRIRPSSD
FYGQPQQGGHGPAGLDIDSQDKIAQQWIADIDQYETTLEEMAAATLDQDFKDELSAIEQW
FRVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPATFDKDPMSSRLS
DAMNKLSVDSARNSFARNSTMSSTKRHSGLDASTINAMFPDAAAAIATEKAKFTQQTGNP
PSSNRNSLAIDPRTGMTGSNIAGATSDSREGNVGSTASPWGSGGDAATSSKAGSSQTPMG
QFVQPPASGGGLRSPRPPQLTSNSTLQTTTLTRDKNAPDLPILSPYASSGNWASMVNTPM
APTFNTGNSSATQADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNDAPGSAHNQMP
APSHINIPNANVVMINEHGQILNRDQLMAIQAQQGLTLGGQRSRPNSPGLPMQSNMGPMA
HFTSPQHNGFLSAYDGSALMAGGMSPVGLGQLGINSHEGYLSDHSDMNRGRSPRGRRGSS
KPPEDPTDPTLLQDIPSWLRSLRLHKYTDNLKDMNWTELIELDDKALEERGVNALGARRK
MLKVFEQVKDAKAEGRIG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgtctggcatcgccggcaaccgcaacagcacccccgaggtcaatgccgcg
ccctctctgaggccgccctcgtcgcgggcagtgggctctggcagctcgctgcgcgcgtct
gccgacatggcggcgatatcagggacctcgcccgccagccgcatcaggccctcgtccgac
ttctacggccagccgcagcagggcggccacggccccgccggcctcgacattgactcccag
gacaagattgcccagcagtggatcgccgacattgaccagtacgagacgacgctggaagaa
atggccgccgccacgctcgaccaggacttcaaggacgagctcagcgccatcgagcagtgg
ttccgcgtcctgagcgaggccgagcgcacggccgctctgtatgcactgctgcagcagacg
acccaggtccagatccgcttcttcatccaggttctgcagcagatgggcaagaatcatccc
atgtctggagttctgtctcccgccacgttcgacaaagacccaatgtccagtcggctgagc
gacgccatgaacaagctcagtgtcgactctgctcgaaactcgttcgctcgcaactcaacc
atgtcgtcgaccaagcgacactctggcctcgatgcctccacgatcaatgccatgtttccg
gatgctgcggccgccattgcaaccgaaaaggctaaattcacccagcagacggggaatcca
ccctcgtcgaaccgcaacagccttgccatagatccccggactgggatgacggggtctaat
atcgcgggtgcgacttcggactccagggagggaaatgttggctcgacagcgtcgccttgg
ggcagcggcggagatgccgcgacgtcctccaaggcgggctcgtcccagacgcccatgggc
cagttcgtgcaacccccggcatccggcggagggctgaggtcgccaaggccaccgcagctg
accagcaactctacgctgcaaacaaccaccctgacgcgggacaagaacgcgcctgacctg
cccatcctgtctccgtacgcgagcagcgggaactgggcgtccatggtcaacactccaatg
gcacccacgttcaataccgggaattcaagtgccacgcaggccgacatggtggccaacgcg
actgcaatgaagctcgcggccctctctacagtcaacaaccgcttcgccttggacgacgtt
cgcaagtaccgacgggccaggtccaacgatgccccgggcagcgcacacaaccagatgcct
gctccgtcgcacatcaacatccccaacgccaacgtcgtcatgattaacgagcacgggcag
atcctgaaccgcgatcagctaatggccatccaggcgcagcaaggtctcacgctcggagga
cagcgatctcgtccaaactctccgggcttgcccatgcagtcgaatatggggcccatggcg
catttcacttcacctcagcacaacggtttcctcagcgcgtatgacggctcggcgttgatg
gccggcggcatgtctcctgtcgggctgggacagctgggcatcaactcgcacgagggatac
ctgtcggatcattccgacatgaaccgcggacggtcaccgagaggaagaaggggaagctcg
aagcctccggaagatcctacggaccccacgcttcttcaggacattcctagctggcttcgc
agcttgcggctacacaagtacacggacaatctgaaggacatgaactggacggaactcatc
gagttggacgacaaggccttggaggagcggggtgtaaacgcgctcggagcacggcgtaag
atgctcaaggtctttgagcaggtcaaagatgccaaggccgagggcagaataggctag
DBGET
integrated database retrieval system
