Trichoderma reesei QM6a: TRIREDRAFT_26277
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Entry
TRIREDRAFT_26277 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIREDRAFT_26277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_26277
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_26277
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRIREDRAFT_26277
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
TRIREDRAFT_26277
U7-dependent histone pre-mRNA processing factors
TRIREDRAFT_26277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
18484346
NCBI-ProteinID:
XP_006963086
JGI:
Trire2_26277
UniProt:
G0RDS7
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
SSSSTLSVPDQIRQLNDARKLVLGDVKYYPSVVRGILPIVGPKAPIELRRWVTDFLAEAF
ATPALPNSEKETMQPYVLTTLESLIETEVDAQVLRNVIQAAASIYPLAMRWIINNSYDTV
TWERMVSIKHKILQLWDSAPPTVRICCIKFAQRVVLAQTVASGAEHRYGGGLDVSLDKVP
PNHQTLDPRMLEAEASGLLDRMLSIFQGNNDGLLVDATLNCLSIMARTRPSTSSRILNAL
LSFNPLQAANSPLTPKTKVMIKSMEKTSRLLLIHLSKRDPHNPIVPRIQQHVETTMRMVA
ELFDSAGRKRPLEPKPQDGYDAKRQRIEASQIQIPPLGPGPHSLADVFTLIGNDGLKYFD
VSQVPPSLVARITVNTLCRLDAQVLAKAVDGVRDRLETLNNSPPAELNPNTAPLGVEEDE
DDYEPDFYQAEDTEQILNKLDNAPAPAAAEPRISLDDTLGLRSFSLPQPQPLTPEMALTA
GKATVTSVLDMMKSLDDSGTKKQKAGFNRLAASSESRDSWMTILTRLATRSSAGLEEITV
KDEAADDSKRTPSLNNSIREILYNYIMEDFRKHIDVAVSWLCEEWYNDRVQRKAGSGGGG
GGDQPTYYEKCTLRLIDGFLPYLHPQDKVLTRFLSEIPELNRAILSRVKHMCRDPSVTQL
ALTSLLYLVIMRPPVKEAALDVVQDIWTEFEDARPMASKYLSKYRPQFLE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
tcctcctcgtcgacgctctccgtgccggaccagatccgccagctcaacgacgcccgcaag
ctggtgctgggcgacgtaaagtactacccgagcgtcgtcagaggcatcctgcccattgtc
ggccccaaggcgccgatcgagctgcggcgatgggtgacggacttcttggccgaggcgttt
gccacgccggcgctgcccaattccgagaaggagacgatgcagccgtatgtgctgacgacg
ctggagtcgctgattgagacggaggtggatgcgcaggtgctgcggaacgtgatccaggcg
gcggcgagcatctatccgctggccatgaggtggatcatcaacaacagctacgatacagtg
acgtgggagaggatggtgagcatcaagcacaagatcctgcagctgtgggacagcgcccct
cccacggtgaggatatgctgcatcaagtttgcccagcgagtggttctggcgcaaaccgtc
gcttctggcgccgagcacaggtatggcggtggactagacgtctcgctggacaaggtgccg
cccaatcaccagacgcttgaccctagaatgctcgaggcagaggcaagtgggctgctggac
cgcatgttgagcatcttccagggcaacaacgatggtcttctagtagatgcgactctgaac
tgcctgtccatcatggcgcggactcgcccctccacatccagccgcatcctcaatgcattg
ctcagcttcaaccccctgcaagcagccaactcgccattgacccccaagacaaaggtgatg
atcaagtccatggaaaagacctcgcggctgctcttgattcacctgagtaagcgagacccc
cacaacccaatcgtgcccaggatacagcagcatgtcgagaccacaatgcgtatggtggcc
gagctcttcgacagtgccggccgcaagaggcctctggagcccaagccccaagatggatat
gatgccaagcgccagaggatcgaggcttcccagatccagatccctcccctgggccctggc
ccccatagcctggccgacgtcttcaccctcatcggcaacgacgggctcaagtactttgac
gtctcccaggtgccccccagcctcgtagccagaatcaccgtgaataccctgtgtcggttg
gatgcccaggtccttgcaaaggctgtagatggtgttcgcgaccggctggagacgctgaac
aatagccctcccgccgagctgaatccgaacactgctcccctgggcgtggaggaggacgag
gacgactacgagccggatttctaccaggccgaagatacggagcagattctgaacaagctg
gacaacgccccggcaccggctgcggcagagcccagaataagcttggacgacaccttgggg
ctgcgatccttcagccttccccagccgcagccgttgacgccggagatggcgctcactgca
ggcaaagcgacggtgacgagcgtgctggacatgatgaagtccctggacgactcgggaacg
aagaagcaaaaggcgggcttcaaccggctcgcggccagctccgagagcagagactcgtgg
atgaccattctgacgcgcctcgcaacccggtcatcagccggtctcgaggagattacggtc
aaggacgaggccgccgacgactctaagcggaccccgtccctgaacaacagcatccgggag
attctctacaactacattatggaagactttcgaaagcacattgacgtcgccgtctcgtgg
ctctgcgaggagtggtacaacgacagggtgcagcgcaaggctggcagcggcggcggcggc
ggcggcgaccaaccgacgtactacgaaaagtgcacgctgcggctcattgatgggttcctc
ccgtacctgcacccgcaggacaaggtgctgacgcggttcctgagcgagatccccgagctg
aaccgggcgattctgtcgcgggtgaagcacatgtgtcgggatccgagcgtgacgcagctg
gcgctgacgagtctgttgtatctggtgattatgcggccgcctgtgaaggaggctgcgctg
gacgttgtgcaggatatatggacagagttcgaagatgctaggcctatggcgagcaaatat
ctcagcaaatatcggccacagttccttgaa
DBGET
integrated database retrieval system
