Trichoderma reesei QM6a: TRIREDRAFT_36941
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Entry
TRIREDRAFT_36941 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_36941
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIREDRAFT_36941
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRIREDRAFT_36941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SprA-related
Motif
Other DBs
NCBI-GeneID:
18484683
NCBI-ProteinID:
XP_006965247
JGI:
Trire2_36941
UniProt:
G0RJH5
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
KRDPRAWDALTPPLAQWILDAVSSMGFKQMTPVQAATMPQFLGNKDVVVEAVTGSGKTLA
FLIPIVQRLLRLEEPTKKHHVGAIVISPTRELAAQIHTVLLSLLEFHAPSAEILPHLKGE
DKRPSNTVPAIVPQLLVGGTTTPAQDLSYFVRHSPNLLISSPGRLVELLGSRHVHIDQSF
EVLVLDEADRLLDLGFKQDLQTILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEV
KVKMKDGGVVEDRRIPASLQISYLITPASHKLPALAQLLERLPVRPQKSIVFLSTCAAVD
YFQHTLPQILPEGFSLLPLHGKHPAKVREKNFNRFLTSVSPTVLLTTDLAARGLDIPQVD
LVVQIDAPSDPKVFIHRSGRAGRAGRKGLAVVMLHPGHEEDYAKFLEIRQTPITPLTKPS
ISVTEEEARTATSKFRKLLQSDRAIHDKAQKAFVSWVRSYGAHQATSIFRVADLDWTDLG
HAWGLLRLPRMPELKNWSGDKMLGVEMDWDTFAYKDAAREKARLEAMAADRSGETEKKAA
EAKRKRKNNEAWSGKHEQEEHRVERREKRHKKREAELTAKMTDEEKAKQAELKELIRKVR
EQNLAKAAAE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
aagagggatcccagagcctgggatgctctaacaccccccttggcgcaatggattctcgat
gccgtctccagcatggggttcaagcaaatgacgccggtgcaagctgcgaccatgccgcag
tttctgggaaacaaggatgtggtggtcgaggccgtcaccggtagtggaaaaacacttgct
ttcctcatacccatcgttcagaggctactgcgcctggaggagcccaccaagaagcaccat
gtcggcgcaatcgtcatctcgccgacgcgagagctcgctgctcagattcacacagtcctc
ctctcccttctcgaattccacgcgccctccgccgagatcctgccacacctgaaaggcgaa
gacaagcgacccagcaacactgtgcctgccatcgtgcctcagctgctcgttggaggaacc
accacgcccgcgcaagacctcagctactttgtccgacacagccccaacctcttgatatct
tctccaggtcgacttgttgaattgctgggctcgcgccacgttcacattgaccaatctttc
gaggtgctcgtcctcgacgaagccgaccggctgctcgaccttggcttcaagcaagacctc
caaaccattctttcacaccttcccaaacagcggcgaaccggcttgttcagtgcgagcgtc
agcgaagcggttggcgagattatcagagttggactgcgcaatccggtcaagattgaggtc
aaggtgaagatgaaggacggtggagtggttgaggataggaggatccccgcaagtctccag
atatcctaccttattacgccggctagccacaagctgcctgccctggcgcagctcttggag
cgcctgcccgtacggcctcagaaaagcatcgtctttctgtctacctgcgctgccgtcgac
tactttcaacatactctaccgcaaatcttgcccgaaggattctcattgctgcctttgcat
ggcaagcaccccgccaaagtgcgcgagaagaactttaaccgtttcctaacctcagtctct
cctacggtgcttttgacgacagatttggcagcccgtggcttggatattccgcaggtcgac
ttagtcgtccagatcgatgctccgtcagaccccaaggtctttattcacaggagtgggcga
gctggtcgcgccggtagaaagggactggcagtggtgatgcttcatcctggacacgaggaa
gactacgcaaagttcctcgagatccgccaaacccccatcacgccattaacaaagccttca
atttccgtgacggaagaagaggctcgcactgcgacgtcgaagttcaggaaactgcttcag
tcggatcgcgcgatccacgacaaggcccaaaaggctttcgtcagctgggttcgcagctac
ggagcgcatcaggccacatcaatattcagagttgccgacctggactggacggatctcggg
cacgcttgggggctacttcgtctgcctaggatgcctgagctgaagaattggagtggagat
aagatgctgggagtcgagatggattgggacacatttgcctacaaggatgcggcacgagaa
aaggcgagactggaggccatggcggctgacagatcgggagagacggaaaagaaggcagcc
gaggcgaaacgtaagaggaagaacaacgaagcttggagcggaaagcacgagcaggaggag
caccgcgttgagaggagagagaagcggcacaagaagagagaggctgagttgacggccaag
atgacagacgaggaaaaggccaagcaggccgaactcaaggagctgatccggaaggtcaga
gagcagaacttggccaaggccgcggcagag
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