Trichoderma reesei QM6a: TRIREDRAFT_3707
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Entry
TRIREDRAFT_3707 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_3707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_3707
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
TRIREDRAFT_3707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_19
TPR_22
TPR_1
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_17
TPR_12
TPR_11
TPR_7
ARM_TT21_N
ANAPC3
ARM_TT21_C
ARM_TT21
ARM_TT21_5th
TPR_6
TPR_Slam
T7SS_EccA1_N
DUF4919
TPR_10
TPR_COPA_B
SLATT_6
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
18484686
NCBI-ProteinID:
XP_006964811
JGI:
Trire2_3707
UniProt:
G0RI83
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MSTKAALKSINDAVREKNYDDAIQKARELLKKDPKHYQAHIFLGFALDQKNKLDEAEAIY
EAAAKLRPEDAPAWQGLIKLYEKQGAKKLQEYHRAAVSLAQVFHKAEDMYKCQDVVDKFV
DFARAHGDQLQYADALRIRLPESPLFPILEGRFPHPAKTYESIVLILEAYEKKTINTLIG
ERRTRLGATLTDVTLEVKREVYQKSNLEHFYRQLINWTTDDDARRNYEEKLIQYCYDHVA
VAPAGPQKTAEQQKVLGLANDMVIIKHPFRLAWEIAINWQDKKEIRDYDVDLLRNYCSFF
PETDLYKIITGFLTSHFSPFPSPPPEPKTAASPDNETSEDSDEEDGGAPTFVVPLTEEDR
LIMMTDGISTSESVFGYRLVGEYLLRSGEYESTVELMRKAMPFLAKEKQRIGMSYQNTED
AYSISLATALIYYQSPRHHQEAKRLFDKVLEHDATSTPAMIGVGLIFEEEEDYEEAIDFL
TRALARDRSNLRVKSEAAWVKALRGDWQTALGELQECVEPLEKQGEAAKELLADTQYRIG
MCIWNLETDRQSRKRKKGECAYAYWLKALNNSLNHAPTYTSLGIFYADYASDKKRSRRCF
TKALELSSSEVTAAERLARSFADDGDWDRVELVAQRIIDSGKVKPPPGSKRKGISWPFAA
LGVAELNKQDFHRSIVSFQAALRISPNDYHSWVGLGESYHSSGRYIAATKAILNAKKLEE
ESKVDVSADTWFTNYMLANIKRELGEFDEAITLYQTVLETHAEEEGVILALMQTMVDNAV
TSVDRGLFGKAVHLAMDAIDFATKRSGSVLETFNFWKSIAEACSIFSTVQSRTADFPLDS
IKPLLESRPQEAFDILANVDKVGTDVVYQKVETNEHFSLEIAACIHATILSYKQAIHVSS
GDIHAQAVAYYNLGWAEYRAHTCLPSQLRKKPSPYLRAAVRAFKRSIELEASNADFWNSL
GVVTSEINPAIAQHAFVRSLHLNERSPVTWTNLGTLALLSGDLKLANEAFTRAQSNDPDY
AHAWLGQGFVALLLGEAKEARSLFTHAMEISESSSLPARRHYSSSLFDHILTAPLNLNVA
SLIQPLFAVNQVQSLRPDDLTFVHLGTLLQERTGESSRAVATLERICEKLEANYEKTESA
DDLARFTLARTDLARAYLASGSYEQAVECGEMALGLSGDESESELTSDQRKKARLSAHLT
VGLAQYYLKAYDDAEKCFESALEESDNNPDATCLLAQVLWAQGTEAARERARNALFEVIE
KQPDHVQSVLLLGVIALLDQDEASLEAVVEELQGLRTNDKVTAKEQSRIGQVLRAVAALG
EGKTQQDMISQVQTDIMLYPYLPHGWSSLAETAGEDGDYPAEVSLMVAARGIPPRGTLEA
HDLAKAYAGTGRVADAQRAAFLAPWEGAGWSALEISVEGM
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaggcagctctcaaaagcatcaatgatgccgtgcgcgagaagaactatgat
gatgccattcagaaagcccgggagttgttgaaaaaggaccctaagcattaccaggcgcat
atcttcctgggtttcgcgttggatcagaagaacaaactggatgaggctgaggccatctac
gaagcagcagccaagctgcgtcctgaagacgcaccggcttggcagggcctcatcaagctg
tatgagaagcaaggtgccaagaagctgcaggagtatcaccgagccgcggtcagcctggcc
caagtctttcacaaggcggaagacatgtacaagtgccaagatgttgttgacaagtttgtc
gactttgcccgagcccatggagatcagttacagtacgccgatgccttgcgcatcaggctc
cctgagagccccttgtttccgatactcgagggccgcttcccgcaccccgccaagacgtac
gaaagcatcgttctcatcctcgaggcgtatgagaagaagaccatcaacacgctcattgga
gagcggcggacgaggctgggcgcaacgttgaccgacgtcaccctggaggtgaagcgcgag
gtctaccaaaagagcaacctagagcacttttaccggcaactcatcaactggacgactgac
gatgatgcgaggagaaactacgaggaaaagttgatccagtactgctacgaccatgtcgcc
gtggcgcctgcggggccgcaaaagacagctgaacagcaaaaggttctcggattggcgaac
gacatggtcatcatcaagcaccccttccgattggcctgggaaattgccatcaactggcag
gataagaaggagattcgtgactacgacgtggatctgctgaggaactactgcagcttcttc
ccggaaaccgatttgtacaagatcatcaccgggtttttgacaagccacttttctcctttc
ccatcaccgccgccagaacccaaaacggccgcctcccccgataatgagacatcggaggat
agcgacgaggaggacggtggcgcgccaacctttgtggtccccctgaccgaggaagatcgg
ctaatcatgatgactgacggcatctcaacctcggaatccgtctttggctacagactcgtg
ggggaatacttactgcgatccggggagtacgagtccacggtggagttgatgcgcaaggcc
atgcctttccttgccaaggaaaagcaaaggattggcatgtcataccagaacacggaagat
gcgtattccatctctcttgcgaccgcgctcatctactatcagtcaccgagacaccaccaa
gaggccaaacgtctgtttgacaaagttttggagcatgatgcaacgtcaacgcctgccatg
attggcgtaggcctgatctttgaggaggaggaggactacgaagaggcgattgacttcctc
acgcgcgcattggcccgagaccgttcaaatctgcgtgtcaaatccgaggctgcctgggtc
aaggcgcttaggggagattggcaaaccgctctaggagagttgcaggagtgtgtggagccg
ttggaaaagcaaggggaagcggccaaagagctgttggccgacacccagtaccgcatcgga
atgtgcatctggaacctggagacggaccgccagtctcggaagcggaagaagggcgagtgt
gcctatgcttactggctcaaggcgctgaacaactcgctgaaccatgccccgacgtacacc
agcctgggcatcttctacgccgactacgcatcggacaagaagcggtcgaggcggtgcttc
acaaaagctctggagctgtcgtcgtcggaagtgactgcggccgaacggttggcccgctcc
tttgcagacgatggcgactgggatcgagtggagctggttgctcagcgcatcatcgactcg
ggcaaggtgaagcctccgccggggtctaagcggaagggtatcagctggccatttgcggcc
cttggtgttgcggaactgaacaagcaagacttccacaggtccattgtgtcgtttcaagcc
gccctcagaatctccccgaatgactaccactcctgggttggactcggcgagagctaccac
agctctggacgctacattgcagcgaccaaggccatcctcaatgccaagaagttggaggag
gagtccaaggtggacgtgtctgcagacacttggtttaccaactacatgcttgctaacatc
aagcgggaactgggcgagtttgatgaggctatcacactctatcagacggttctggagacc
catgccgaagaggaaggagtgattctcgcgttgatgcagactatggtggacaatgccgtc
acgagcgtggatagaggcctgtttgggaaggcggttcatctagccatggatgccattgac
tttgccacaaagagaagtggcagcgttctggaaaccttcaacttctggaagagcatcgcc
gaggcttgctctatattcagtacggttcagagccgaacggcagactttcctctcgactcc
atcaagccgctgctggagtctcggccacaagaggcttttgatatcctcgccaatgttgac
aaggttggcaccgatgtcgtctatcaaaaagtcgagacaaacgagcatttcagccttgag
attgcggcatgcatacacgcaacgatcttgagctacaagcaggccatccacgtatcgagc
ggcgatattcacgcacaggccgttgcgtactataacctgggatgggccgaatatcgggct
catacatgcctgccatcacagctacggaagaagccgagcccctacctaagggctgctgta
agagctttcaagcgatccattgaactagaggccagcaatgcggatttctggaactcccta
ggagtggtgacgagcgaaatcaaccctgccattgcccagcacgcctttgtcagaagtctg
cacttgaacgagcgtagtccagtgacttggacgaacttggggacattggcattgctgtca
ggagacttgaagctcgccaacgaagcctttacgagggcccagtcaaacgacccggattat
gcgcatgcctggctcggccagggctttgtggcactcttgctcggcgaggccaaggaggcc
aggagcctctttacacacgccatggagatttcggaatcgtcatcgctgcctgcacgccgt
cattactcgtcttcgctttttgatcacatcttgacggcaccgctcaatctgaacgtggcg
tcgctgatccagccgctctttgccgtgaaccaggtgcagagcctgcggcccgatgatttg
acctttgtgcacctcggaaccctcctgcaagagcgcacgggcgaaagttcccgcgccgtc
gccactctggagaggatttgcgagaagctcgaggccaactacgaaaagaccgagtccgct
gatgacctcgccaggttcacgctggctcggacagaccttgcgcgggcatacctcgcctct
ggatcgtacgagcaggccgtcgagtgcggcgagatggcgctaggattgagcggcgacgag
agcgagagcgagctgacgagtgaccagcgcaagaaggcccggctgtcggcgcacttgacc
gttgggcttgcgcagtactatctcaaggcgtatgacgatgcagagaagtgcttcgagtca
gcgttggaagagtccgacaacaatcctgacgcgacatgcttgctcgctcaggtcctatgg
gcccagggcaccgaagccgcaagagaacgggcgcgcaatgccctgtttgaggtcattgag
aagcagcccgatcacgtacagagcgtgctgctcctgggcgtcatcgccctgttggaccag
gacgaggcaagcctggaagccgtagtcgaagagctccaagggctgcgaacaaacgacaag
gtgacggccaaagagcagtcccgcatcggccaagtcctgcgagccgtggccgccctcggc
gaaggcaagacacagcaggacatgatttcgcaggtgcagacggacattatgctctatcct
tacctcccacacggctggtcatcccttgctgaaacagcgggagaagacggcgactatccg
gccgaggtgtcgctcatggtggcggccaggggcattccgccgcgggggacgctggaagcg
catgacttggccaaggcgtatgccggcacgggcagagttgcggatgcgcagagagcggca
ttcttggctccttgggagggagctggttggagtgctttggaaattagcgttgagggcatg
tga
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