Trichoderma reesei QM6a: TRIREDRAFT_40945
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Entry
TRIREDRAFT_40945 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRIREDRAFT_40945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_40945
Enzymes [BR:
tre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TRIREDRAFT_40945
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TRIREDRAFT_40945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
18484804
NCBI-ProteinID:
XP_006963098
JGI:
Trire2_40945
UniProt:
G0RE54
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
DTEDLLRHYFNLNIDLASLYRQWSKDDPNFRKKAPQFTGVRILNQDAWEALICFICSSNN
NISRISQMAHKLCKYYGPLIGHVDGEAMHDFPTPESLTDKTVEARLRELGFGYRAKYIAE
TARIIAQEKPSAWLDSLRNPDFPAFNAVAVSDGPQSTYKDAQTALLSLTGVGPKVADCVC
LMGLGWGESVPVDTHVLQIAQRDYRFGKKGPKTINKAMYDAIGDHFRSIWGKYAGWAHSV
LFTADLREFSGRMIVEKVE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gacacggaagatctccttcgtcactacttcaatctgaacatagatcttgcttcgctgtat
cgacagtggtccaaagacgaccccaactttcgaaaaaaggcaccgcagtttacaggagtc
cgaattctgaaccaggatgcatgggaggctttgatatgctttatatgcagcagcaacaac
aacatatctcgaatatcccagatggcccacaagctctgcaaatactatggcccgttgatc
ggtcatgtagatggagaagccatgcacgactttccaaccccagagtctctcacagacaag
acggtcgaggctcgtctaagggaactcggatttggctatcgagccaagtacattgcagaa
acggcgcgcatcattgcacaggagaagccttcagcatggcttgactcattacggaatccg
gacttccctgctttcaacgctgttgcagtatcggacggaccacagtccacctacaaagat
gctcagactgcattactctcacttactggcgtaggcccaaaggtagccgactgcgtgtgc
ttgatgggccttggatggggagaatcagtgccggtcgatacgcacgttctacaaatagcc
cagagggactaccgctttggcaagaagggccccaaaaccatcaacaaggccatgtatgat
gcgattggcgatcatttcaggagcatatggggcaaatatgcgggctgggctcattccgtc
ttgttcacagctgacctacgggagttttcaggccgtatgatagtcgaaaaggtcgaa
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