Trichoderma reesei QM6a: TRIREDRAFT_4136
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Entry
TRIREDRAFT_4136 CDS
T02991
Name
(RefSeq) transcription elongation factor 5
KO
K15172
transcription elongation factor SPT5
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TRIREDRAFT_4136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_4136
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_4136
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TRIREDRAFT_4136
RNA polymerase I system
TRIREDRAFT_4136
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TRIREDRAFT_4136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5_N
KOWx_SPT5
CTD
KOW5_SPT5
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW
DUF3912
MS_channel_2nd
Motif
Other DBs
NCBI-GeneID:
18484825
NCBI-ProteinID:
XP_006965560
JGI:
Trire2_4136
UniProt:
G0RKV3
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MASNDRDRFDDSEDEEDFNPAPADMSDDEEANDASSRARDSSPNRRQEADDDEEPTPAKS
RRARDEDEDEEEEDEEEEAGTRGRHDDDDEEEEEEEEDDEDEDDVQHGHRRKRQRDRRNA
FIDIEAEVDDEDEGEDDEKDGEEIEDFIIDNAHPDDLVESSRLDDDRRHRELDRRRELES
SMDAEKQAEILRQRYGNRRPGKSFGDSAVVPKRLLLPSVDDPSIWAVRCKEGKEREVVLS
IMKRVDERRGTKDELAITAAFERGGPDSVMKSFVYVETQRQTDILVALDGILNVYPHSKL
TLVDIKDMPELLRVTKTPTLEPGAWVRLRKPAKHNGDLAQVIDVTENGLEARVRFIPRLD
YGMRDEALSAVTADGKRKRAPGMGPRPPQRLFSEVEARKRHPRHIQGNPTTNTWTYMGEE
FENGFQVKDVKIQQLVVTDVNPSLEEVTRFASGADDGTENLDLKALAASLKDSNTLVTYL
PGDIIEVYAGEQRGVVGKATNVQGDIVTMFVTEGDLKGQSIEVPIKGLRKRFKIGDHVKV
IGGSKFQDEVGTVVKISEDRVTLLTDHTNNEVTVFSKDLREASDIGGQGSLGQYELHDLV
QLDPTTVGCIVKVDRESLVVLDQFGDTRQVMPSQIPNKLPKRKQAVAADREGSEIRLDDV
VKEFSGQQRQGKIIHIHRSYVFLHTHATNENAGVFVTKASMVNTIAAKGGRVNAAASGPD
LSTMNPALKIHKNGTENKPIAKTFGRDRAINQTVIIKKGYYKGLLGIVKDTTDTHARVEL
HTKNKTITLPKDSLSYKDKITGTTIDINGRGRPTPGGAGRGSGDRVPGWQGGSRTPMGAG
GSDRVPAWGSRTPMAGGRTPAWKGQDYSGSRTPAWADGSRTVNPYDGSRTAYGSGSRTPA
WQAGARTPAAGDAFGAGSRTPAYAGGGDSWNSGSKTPAWGVSAPTPGASGNDSWGYTPAA
TSSAAYDAPTPGGAMSAPTPGALSAPTPGAYNAPTPGVSATPAGGWQGGWGGPDSAPTPA
AGAPTPSAGYGGYSAPTPAAYAPETPAASGPRYTDDD
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacgatcgcgaccgcttcgacgactccgaggacgaggaggacttcaaccct
gcgcctgccgacatgtctgacgacgaggaggctaatgacgcctccagccgggcgcgagac
agcagccccaatcgccgccaggaggccgacgatgacgaggagcccacgcctgccaagtcg
cgcagggctcgggatgaggatgaagatgaagaagaagaagacgaggaagaggaagcgggt
actcgtggtcgccatgacgatgacgacgaggaggaagaagaggaagaagaggatgacgag
gatgaggatgatgttcaacatggtcatcgcagaaagcgccagcgcgataggcggaacgcc
ttcatcgatatcgaggccgaagtcgatgacgaagacgagggtgaggacgacgaaaaggat
ggtgaggaaatagaagacttcatcatcgacaacgcccaccccgacgacctggtcgagagc
tcgcgactggacgatgaccgacgacaccgcgagctcgatcgccgccgcgagctggagtcc
agcatggacgccgagaaacaggccgagatcctgcgccagcggtacggcaatcgacgaccc
ggcaagagctttggcgactcggccgttgtgcccaagcgccttctcctccctagtgtggac
gatcccagcatctgggccgtgcgatgcaaagaaggcaaggagcgagaggtcgtcctctcc
atcatgaagcgagtggatgagcgaagaggcacaaaggacgagctggccattaccgcggct
tttgagcgcggcggcccagattccgtcatgaagagcttcgtctacgtcgagacccagagg
cagactgatattctcgtcgccctcgatggtattctcaacgtctatccccactccaagctg
acgctggtggatatcaaagacatgcccgagctgctgcgcgtcaccaagacgccgaccctg
gagccgggcgcctgggtgcgactgcgcaagccggccaagcacaatggagacctggctcag
gtcattgatgtcaccgaaaacggcctggaggcgagggtccgtttcattcctcgactcgac
tacggcatgcgcgacgaggcgctctctgccgtaactgcagacgggaagcgcaagagggcc
ccgggaatgggcccgcggccgccccagcggctcttcagcgaggtggaggcgcgaaagcgt
catccgcgccacatccagggcaacccgacgaccaacacctggacatacatgggtgaggag
tttgaaaacggcttccaggtcaaggacgtcaagatccagcagctcgtggtcacggacgtc
aacccgtcgctggaagaggtgacgcgattcgccagcggtgccgacgatggcaccgagaac
ctggacctcaaggcgctggcggccagcttgaaggacagcaacacgctcgtcacgtacctg
cccggcgatatcatcgaggtgtatgctggagagcagagaggcgtcgtgggcaaagctacc
aatgtgcagggcgacattgtcaccatgttcgtcaccgagggcgacctcaagggccagagc
atcgaggtgcccatcaagggcctccgcaagcgcttcaagattggtgaccacgtcaaggtg
attggcggcagcaagttccaggatgaggtcggcacggtggtcaagatatccgaggaccgc
gtcacgctcctgacggaccacacaaacaatgaagtgacagtctttagcaaggatttgcgg
gaggccagcgacattggcggacagggatcgctcggccagtacgagctccacgaccttgtg
cagctcgatcccaccacggtcggctgcattgtcaaggtggaccgggagtcgctggttgtg
ctggaccagtttggagacactcgccaagtcatgccatcccagatccccaacaagctgccc
aagaggaagcaggcggttgccgctgatcgggagggttcagagatccgcctggacgacgtg
gtcaaggagttttccgggcagcagcgccagggcaagattatccacatccaccgctcgtat
gtgtttttgcacacgcacgcgacgaacgagaatgctggtgtctttgtcaccaaggcgagc
atggttaacacgatcgctgctaagggaggccgtgttaacgcagcagcgtcgggccctgac
ttgtccaccatgaacccggccctcaagattcacaagaacggcaccgagaacaagccgatt
gccaagacgtttggtcgggaccgcgccatcaaccagaccgtcatcatcaagaagggatac
tacaagggcctcctgggtatcgtcaaggacacgacggatacgcacgctcgcgtcgagctg
cacaccaagaacaagacgattacgcttcctaaggattctctcagctacaaggacaagatc
acgggcacgaccattgacatcaacggcagaggacggccgacgccgggcggagcagggcgc
ggctccggggacagggtgcctggctggcaaggaggatcccgcacgccaatgggcgctgga
ggttcagaccgcgttcccgcttggggatcacgaactcctatggcaggtggccgtacaccg
gcgtggaagggccaggattactctggatcgcggacgccggcttgggctgacggatcgagg
actgtcaatccgtatgacggaagccggacagcctacggttcgggctcacgcacgcccgcc
tggcaagctggtgctagaaccccggcggcaggcgacgcgttcggggccggttcacgcact
ccggcatacgctggtggaggggacagctggaattccggctccaagacgccggcctggggt
gtttcggcgccgacgcccggggccagcggcaacgactcctggggctacactccagcggcg
acgtcttccgccgcctacgatgccccgactcccgggggtgccatgtcagctcctactcct
ggtgccttgagcgcgcccacgcccggtgcctacaacgctcccaccccgggagtttcagcg
actcctgccggcggctggcaaggcggatggggaggcccggactcggcaccaacaccagcg
gctggtgctcccacgccgtctgctggatacggaggctactcagccccaacgcctgcagct
tacgcgcccgagacgcctgcggctagtggtccgaggtacacggatgatgattga
DBGET
integrated database retrieval system
