Trichoderma reesei QM6a: TRIREDRAFT_42919
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Entry
TRIREDRAFT_42919 CDS
T02991
Symbol
rpl40
Name
(RefSeq) ubiquitin fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03010
Ribosome
tre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TRIREDRAFT_42919 (rpl40)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRIREDRAFT_42919 (rpl40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tre03011
]
TRIREDRAFT_42919 (rpl40)
04121 Ubiquitin system [BR:
tre04121
]
TRIREDRAFT_42919 (rpl40)
Ribosome [BR:
tre03011
]
Ribosomal proteins
Eukaryotes
Large subunit
TRIREDRAFT_42919 (rpl40)
Archaea
TRIREDRAFT_42919 (rpl40)
Ubiquitin system [BR:
tre04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
TRIREDRAFT_42919 (rpl40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
DUF2604
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18484898
NCBI-ProteinID:
XP_006965948
JGI:
Trire2_42919
UniProt:
G0RKY4
LinkDB
All DBs
Position
Unknown
AA seq
74 aa
AA seq
DB search
FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
ESTLHLVLRLRGGI
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
ttcgtgaagaccctgacgggcaagaccatcacccttgaggtcgagtcctccgacacgatc
gacaatgtcaagtccaagatccaggacaaggagggcattcccccggaccagcagcgattg
atcttcgctggtaagcagctcgaggatggccgaaccctgtccgactacaacatccagaag
gagtccactctccacctcgtcctccgtctgcgtggtggtatc
DBGET
integrated database retrieval system