Trichoderma reesei QM6a: TRIREDRAFT_43268
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Entry
TRIREDRAFT_43268 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03013
Nucleocytoplasmic transport
tre03015
mRNA surveillance pathway
tre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIREDRAFT_43268
09122 Translation
03013 Nucleocytoplasmic transport
TRIREDRAFT_43268
03015 mRNA surveillance pathway
TRIREDRAFT_43268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_43268
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_43268
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRIREDRAFT_43268
Spliceosome [BR:
tre03041
]
Complex C
Other components
EJC/TREX
TRIREDRAFT_43268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
18484916
NCBI-ProteinID:
XP_006968433
JGI:
Trire2_43268
UniProt:
G0RTH2
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
RSIEGWIIIVTNVHEEADEEALQDKFGDYGEIKNLHLNLDRRSGYVKGYALIEYATLEEA
RAAIDGAHNTKLLDQTIQVDFAFVRPPP
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
cggtcaatcgaggggtggatcatcatcgtcacgaacgtccacgaggaagccgatgaggaa
gccttgcaggacaagttcggcgactacggagagatcaagaaccttcacctgaacctcgat
agacgcagcggttacgtcaagggatacgccttgatcgagtacgcgacattagaagaggcg
cgcgccgcgatcgatggagcacacaacacaaaactgctagatcagacgattcaagtcgac
ttcgcctttgtcagacctcccccg
DBGET
integrated database retrieval system