Trichoderma reesei QM6a: TRIREDRAFT_49373
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Entry
TRIREDRAFT_49373 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRIREDRAFT_49373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_49373
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRIREDRAFT_49373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WD40_RFWD3
CPSF_A
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_DCAF12
RAB3GAP2_N
Beta-prop_WDR19_2nd
KNTC1_N
WD_LRWD1
Beta-prop_NUP159_NUP214
VPS11_N
Motif
Other DBs
NCBI-GeneID:
18485255
NCBI-ProteinID:
XP_006966449
JGI:
Trire2_49373
UniProt:
G0RM60
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MATQVAPLPRVKLASGPAPLTAEQKYWKSFKNQLLIPSPTNFPVTHVSSSNDSFAVTTGT
RVQIYSIRSRKLLKTITRFTDVARSGEIRKDGRVLVAGDDTGRIQVFDVNSRAILRTWLD
HKQPVWTTKFSPVELTTVLSTSDDRTVRLWDLPSSEPTSTFVGHTDYVRAGSFMPGTMAN
MVVSGSYDSTVKLWDPRTGNNAAVMTFKHAAPVESVLPLPTGTTVLAAAGNAVSVLDLVA
ARPLHLITNHQKTVTSMSLASGGRRLVTGSLEGHVKMFETTGWNVVNSFKYQAPILSVCV
IPSGDASGADDRHLAVGMQSGVLSIRTRMTGAEATKQREREKEMEALVAGTIDSLDAKKQ
KRKRRIEASKRLDMLGEGADVVIANEGRVTRKKERPWQADLRHARYAKALDQVVDRTSPE
YAPLNVLTLLLALRHRSAMRDALENRDEQSVQPVLKWVCGHICDPRYVSVCVEVGIHLLD
LYSEYAGASAELLQGFKTLHRRVKVEVERAQLACQSGGMLESLMMSAV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaagtggcgcccctgccgagggtcaagctggcatcgggccccgcgcccttg
accgcagagcagaaatactggaagtcattcaagaaccaactcctcatcccgtcgccgacc
aactttccggtgacgcacgtgtcgagcagcaatgactcctttgccgtgacgacgggcacc
cgcgtgcagatctactcgattcgcagccgcaagctgctcaagacaatcacacgcttcaca
gatgtggcgcgcagcggcgagattcgcaaggacgggcgcgtgctggtggcgggcgacgac
acgggaaggatacaagtgtttgacgtgaactctagggctattctgcggacatggctcgat
cacaagcagcccgtgtggacgaccaagttctcgcccgtggagctgacgacggtgctgagc
acgagcgacgacaggacggtcaggctgtgggatctgccgagcagcgagccgacgagcacg
tttgtgggccacacggactatgtgagggctggaagcttcatgccgggcaccatggccaac
atggtggtgtcgggaagttacgattcgaccgttaagctgtgggatccgcgaacgggcaac
aatgccgccgtcatgacattcaagcacgccgcccccgtcgagagcgtccttcccctgcct
acggggacgacggtcctggccgctgccggaaacgccgtcagcgtgctcgacctcgttgcc
gcgcgaccgctacatctcattaccaaccaccaaaagacggtcacgtccatgagcctggcc
tctggtggccgccgcctcgtcaccggcagcttggaaggccacgtcaagatgtttgagacg
actggatggaacgttgtcaacagcttcaaataccaggcccccattctctctgtctgcgtc
atcccctcaggcgatgcctccggggctgacgatcgccatctcgccgtcggcatgcagtct
ggcgtgctcagcatccgcacgcgcatgacgggcgccgaagccacgaagcagcgcgagcgc
gagaaggagatggaagccctcgttgccggaaccatcgactccctcgacgccaagaagcag
aagcgcaagcgccgcatcgaggcctccaagcgccttgatatgctcggcgaaggcgccgac
gttgtcattgcgaacgaaggccgcgtcacgaggaagaaggaaagaccatggcaagccgac
ctccgccacgcccgctacgccaaggcccttgaccaagtcgtcgaccgcacctcgcccgaa
tacgcacccctcaacgtcctcaccctgctgctcgcgctccgtcaccgcagcgccatgcgg
gatgcgctggagaaccgcgacgagcagagcgtgcagcccgtgctcaagtgggtatgcgga
cacatttgcgacccgcggtacgtgagcgtctgcgtggaggttggcattcacctgctggat
ctgtattcggaatacgctggcgcttcggcggagctgcttcaggggttcaagacgttgcac
aggagggtcaaggtcgaggtcgagagggcgcagttggcctgtcagagcggaggcatgctg
gagagcctgatgatgagcgcggtataa
DBGET
integrated database retrieval system