Trichoderma reesei QM6a: TRIREDRAFT_49770
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Entry
TRIREDRAFT_49770 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_49770
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIREDRAFT_49770
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
90S particles
Helicases
TRIREDRAFT_49770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CENP-B_dimeris
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
18485273
NCBI-ProteinID:
XP_006966780
JGI:
Trire2_49770
UniProt:
G0RNQ2
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MDILKVLSRGTKKSAKSSLAGGSAVGKLPSSGTKPNPQLFHDEVRGHKRKRDAHESESNK
IPEELPEVDFFAPKDAAAEAKPTKADASNKNKGKREASPAAEAARLLSPEECRQLLRSHR
LKVTLLYKREEEQNKVKKSKKQKKAAAAAAVVVEAKKDHKKPPQLTPQPLESFGQLRSTY
NLSRRVAENLAYQGYRVPTEVQMGSMPLLIRPDLALKGEEGLERGVDLLAVAPTGSGKTI
SFLVPTINNIMRRRAEEKLHGIHELEAIVIVPTRELAYQIVSVGSQLVKGTGIKVLGMRK
GMALAAESQDIGEDSSDEEEEKAEESDEEEDEEEDEHGKPKAVAKVDILITTPLLLLNFL
TSGSSSTQKILPTVRDLILDEADVLLDPLFREQTLGIWAACSNPDLRLSFWSATMGSNIE
TLVTERLTSRAESLGIPQRPLVRLVVGLKDTAVPNIVHRLIYTASEQGKLLALRQLLRPT
SSIDSGPPLRPPFLVFTQTIERAAALQEELKYDIPLEAGGSSRIAALHSGLPDAARAAIM
RKFRAGEIWVLITTDVLARGVDFAGVNGVLNYDVPGSSAAYVHRAGRTGRAGREGGIAVT
FYTKEDIPFVKTVANVIAASEKQAGKTEDEAGVQKWLLDALPNVGKEDRKKLKERGVESR
RSGNKAMITSRSGYERRKEHNRKGAIEGSKKRKMEAREDGDGGGKEGEWGGFD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaaagtgctctcgcgcggcacgaaaaagagcgccaaatcctcgctcgca
ggcggcagcgccgtgggcaagctgccctcgtccggaacgaagcccaatccgcagctcttc
cacgacgaggtccgcggccacaagaggaagcgcgacgctcacgaatccgagagcaacaag
atccccgaggagctgcccgaggtcgacttcttcgcgcccaaggatgccgctgccgaggcg
aagccgacaaaggccgatgcgtccaacaagaacaagggcaagcgagaggcgagtccggcg
gccgaagcggccaggctgctgagcccggaggagtgtcgccagctgctgcggtcgcaccgc
ctcaaggtgacgctgctgtacaagcgcgaggaggagcagaacaaggtgaagaagtcgaag
aagcagaagaaggccgctgctgctgctgccgtcgtcgtcgaggccaagaaggaccacaag
aagccgccgcagctgacgccgcagccgctggagtcgtttggccagctgcggagcacgtac
aacctgtctcgcagggtggccgagaacctggcgtaccagggctaccgggtgccgacggag
gtgcagatggggagcatgccgttgctgattcggccggacctggcattgaaaggggaggaa
gggctggagagaggggtggatctgctggcggttgcgccgacagggagcggcaagacgatc
agcttcttggttcccacaatcaataacatcatgaggaggagggcggaggagaagctgcat
gggatccacgagctggaggccatcgttattgtgccgactcgagagctggcctatcaaatt
gtcagcgttggcagccagctggtcaaggggactggcatcaaggtgctcggtatgaggaag
gggatggcccttgctgccgagagccaggatattggagaggacagctcggacgaagaggaa
gagaaggcggaggagtctgatgaagaggaagacgaagaggaagatgagcatgggaaacca
aaagcggtggcaaaggtcgacatcctgatcacgacgcctcttctcttgctcaactttctc
acctctggatcatcaagtacacaaaagattttgccaaccgtccgcgacctcatattagac
gaagccgatgtgctcctcgaccccctgttccgcgaacaaacactcggcatctgggccgcc
tgtagcaatccggatctacggctctcgttctggtccgcaacgatgggctccaacattgag
acgctcgtcaccgaaagactgacctcaagggccgagtccttgggcatcccccaaaggccg
ctggtgcgcttggttgtcggcctcaaggacacggccgtgccaaacattgtccacaggctg
atttataccgcgagcgagcaaggaaagctgcttgctctgcggcaactcctgcggcctact
tcgagcatcgattcaggcccgccactgcggccgcctttcctcgtctttacgcagacgatt
gagagagctgctgccctgcaggaggagctcaagtacgacatcccgctcgaggcgggcggt
tcgtccagaatagctgctctgcacagcggccttcccgacgcagcccgagcagccatcatg
cgcaagttccgcgcgggagaaatttgggtgctcatcacgactgacgtcctcgcccgaggc
gtggactttgccggcgtcaacggagtcctgaactacgatgtgccggggtcaagtgcggcg
tacgtgcaccgcgcagggaggacggggcgagctggccgagagggtggcatagccgtcacc
ttctataccaaggaggacattccctttgtcaagaccgttgccaacgtcattgccgcgagc
gagaagcaggcgggcaagacggaggacgaggccggcgtgcagaagtggctgcttgacgcc
ttgccgaacgtcggcaaggaggataggaagaagctcaaggagaggggcgtcgagtcgagg
aggagcggcaacaaggctatgattacgtccaggagcgggtatgagcggcggaaggagcac
aataggaagggggctattgaggggagcaagaagaggaagatggaggctcgggaggacggg
gatggtggtggtaaggagggtgaatggggtggatttgac
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integrated database retrieval system
