Trichoderma reesei QM6a: TRIREDRAFT_51455
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Entry
TRIREDRAFT_51455 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03013
Nucleocytoplasmic transport
tre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIREDRAFT_51455
03015 mRNA surveillance pathway
TRIREDRAFT_51455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_51455
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIREDRAFT_51455
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRIREDRAFT_51455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
18485381
NCBI-ProteinID:
XP_006968529
JGI:
Trire2_51455
UniProt:
G0RTB8
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSDLASRITKPDEAAPAEKQPEAEAPVAEAQNDGAIEELGGSGLQEPEWDVEVSLSDLQN
NEATPFHSATRWEDMGLSEDLLKGLLALKFLKPSKVQGKSLPLMLSDPPRNMMAQSQSGT
GKTAAFVTAILSRVDFSNPEQPQALALAPSRELARQIEGVIKAIGRFIKPLKVAAAIPGA
LPRDQPVRSAVIVGTPGTVMDIIRRRQLDVSQLRVLVLDEADNMLDQQGMGDQCLRVKNM
LPKSIQILLFSATFPDKVGAYAQKFAPNAHSLKLQRNELTVKGISQMFIDCADDNIKYDV
LCKLYGLMTIGQSVIFVKTRESANEIQRRMVADGHKVSALHAAFDGNERDELLAKFRNGE
NKVLITTNVLARGIDVSTVSMVINYDIPMKGRGDSEPDAETYLHRIGRTGRFGRVGVSIS
FVYDKKSYDALSSIANTYGIDLVRLDTDDWDEAEERVKEVIKKNRAQAAYAPSATDNAAK
AS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctcgccagtcgtatcacgaagcctgacgaggcggctccggctgagaagcag
cccgaagctgaagctcccgtcgccgaggcacagaacgacggcgccattgaggagctgggt
ggctctggcctgcaggagcccgaatgggatgttgaggtttccctcagcgacctccagaac
aacgaggcgacgcccttccactctgccacgcgatgggaggacatgggactttccgaggac
ctgctcaaaggccttctagccctcaagttcctgaaaccttcaaaagtgcagggaaagtct
ctccccctgatgcttagcgaccctccgagaaatatgatggcccaatcgcaatctggaaca
gggaagacggcggcgtttgttactgccattctgtcgcgcgtcgacttcagcaaccctgag
cagccgcaagctctggctctggctcccagtcgtgagctggctcgtcagattgaaggcgtc
atcaaggctattggtcgctttatcaagccccttaaagttgccgcggcaattccaggtgcc
ctccctcgcgatcagccagttcgatcggccgttattgttggaacaccaggtaccgtgatg
gatatcattcgacgccgacagttggatgtctcccaactcagggttctcgtcttggatgag
gccgacaacatgttggatcaacagggcatgggcgaccagtgcttgcgagtcaagaacatg
ctgcccaaatccatccagatccttctcttctccgccactttccccgacaaagttggcgcc
tatgcgcagaagtttgcgccgaatgcccactcactcaagctccagcgcaacgaacttacg
gtcaagggtatctcgcaaatgttcattgactgtgccgacgacaacatcaagtacgacgtt
ctgtgcaagctctacggcctgatgaccattggccagtcggtcatttttgtcaagactcgt
gaaagcgccaacgagatccagagacgcatggtggctgacggacacaaagtatccgctctg
cacgccgcctttgacggcaacgaaagagatgagctgctggccaagttccgaaatggcgaa
aacaaggttctcatcaccaccaacgttctcgcccgtggtattgacgtgtcgaccgtctcc
atggttatcaactacgacatcccgatgaagggccgcggcgattctgagccggacgccgag
acatacctccaccgtatcggccgaaccggacgtttcggtcgtgtcggtgtcagtatcagc
ttcgtttacgacaagaagagctatgatgccctcagcagcattgccaacacctacggcatt
gatctggttcgcctcgacaccgacgactgggacgaagccgaggaacgagtcaaggaggtc
atcaagaagaaccgagctcaggctgcttacgccccgagcgcaacggacaacgcggccaag
gcatcctag
DBGET
integrated database retrieval system
