Trichoderma reesei QM6a: TRIREDRAFT_52553
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Entry
TRIREDRAFT_52553 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIREDRAFT_52553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_52553
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_52553
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRIREDRAFT_52553
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TRIREDRAFT_52553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
18485454
NCBI-ProteinID:
XP_006969569
JGI:
Trire2_52553
UniProt:
G0RWF8
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MSFGGFGGFGSNNQQQSTGGFGGFGANNNTTSSGFGSNTGGGFGTNTNTGGGMFGSNTNT
TGGFGSTAGGFGSNTGGFGSKPAFGSTATTTPASGGLFGASSTPSSTGTGFGGFGSNTNT
TATPSAFGSNTTGGGLFGNANKPAGGFGTANTGSSLFGGGSNTTTTGTGFGNFGSTNTLG
GGASGDPPGTAVTPFQAFTEKEPNSSTNQSNAFQNILFQDPYKKWSADELRLADYVQGRR
HGNPSGAGAFGVSSGFGGGFGAANQTSTPATGGFGATNTTGGLFGSNTNTNTATSGFGGG
FGANTAASNTGGGLFGNANKPSGGLFGNTTQQNQTGGLFGSGTTNTATSGFGSTNTAGGG
LFGSANTAASNTGGGLFGSNTQNKPAGTGFSFGNNPSTTSTGFGGATTNAFGSGTNTTGG
GLFGNANTSAQPSGGLFGNTAQQQQAPSGGLFGQAQTQQSGGLFGNAQQKPATGGLFGST
PAATNTGGGLFGGTQQQGSTGLGGTNTNTGGLFGAKPATGGGLFGGTTAGQGNTGGTGLF
GGAGTTAQTQQAGGTGLFGSAANQQKPGGLFGSTPAASGGGLFGNTATGTQGGIFGNAGG
QQQQQGLGLGGSLLGASQQVSNAPQGLTANLNDVSAYGSPSLFSGVSGGEVPNPGPLAVP
LSGQPKPKRPSIFPMYKFTPAASGRFGTPQKRGFGFSYSNYGTPGGASPAGLSGTPNTLG
RSLLGGTGSGTSLTKSVSSNSLRRTVNVDDSILLPGAFSNTNNTRWYGNSGSKKLVINRE
LRSDLFSTPQRDRQNGDNGTGPRKLSKRVSFDTNVDGEDSPPVRAALPAPGDVPETPSDE
TPRSDKATPVSNGLRTPDMEQVKGKDKELAIVQEEETGTPEPPANGFDNAPGKYWMEPTR
EEIQNMNRVQRQRVDNFTVGRENVGSITFKVPVDLSGIDLDELCGGIIQLEPRSATVYPI
AAKKPPVGKGLNVPARISLEQSWPRGGRDKRIANDPKRFNKHIERLKRIVDTTFESYDPE
TGVWTFSVEHFTTYGLDDSDDETEFDTTLDLPAAAPLSNIAPSAAFHAPASSQGDDVMVF
SQSHMLPGAFDEEEGMFTTEQTGQQSFLGVSSADSATHDVKLSLENEMTGDDIAEYDMSE
DEDMTRSSIGQHLAAEHDDASSEGGQDTKRLTATPGGILRARMRAIKDSAGPVKLEVADG
DDWMEMLRKTVSPMKRDRYLLRELAESPYKQGGKTVSFDLGDEADFRKSSIWGKSLTRSD
RKDGAAMSAQIGMDQGHGFATSIDLMNSLFEKPKPKPARRELNASPSAKGLPKSPYERQA
KVVTPEDNELAAPSRPTWGPDETLVLVRSLDGSHSRRSIRDMTDILTFQRSSIQTDEQEI
RLATFAAEPSKKYLQSQDVVTEIRLVEGVPQATLHVTSLKSLYHHKSTNDAASIHEKQVW
ELASILFDDLDNLGSTDEEYLVRRNKLSQFWSDLVEQASSTAVGLAATSEEKALACLAGH
RIPEACKHLLDGKNFRLATLLPMIGTSEVAKREMREQIKSWLDSKMLSEFSEAIRTIYEL
LGGNVCVCEGLKGVPNEDRVDSFVISKKFGLDWKQSFGLRLWYAISSHDDLSVAVDSFKD
DIAQDKEDLPRPWYVEQGIAPLWDDANIDSRQDLLWGLLQLYADADADLEAVLRPENSQL
SPLEARLRWQLGLALTSTGKVSYGADGIEKADAATLAYAAQLTRAGEWLEAAFVLLHLHH
TAARKKALQEHLCQHADLIGFESDANFVTLTDKYRVPAAWVWEALALYMRCVKKDAVAEV
QCLLRAGSHVEAHRILVQHVAPQAIVERDYAGLSSLISQFQDRQQDIAEWTQGGEIYSHF
LQLMESRSRGESATPALLDRLLAGLNAMKDAGVESNITRYAAISDMADETAREIVKLTRQ
KQDMELRSRILSLPLTQDRLLAYSVDLSLDRYREVMSH
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcggatttgggggcttcggctccaacaaccagcagcagtcgacgggcgga
ttcggtggctttggggccaacaataacaccacctcgtcaggcttcggctccaacaccggc
ggaggcttcggcacgaataccaacaccggcggcggcatgtttggcagcaacaccaatacc
acgggcggctttggctcgacagccggcgggtttgggtccaacacgggcggctttggcagc
aagcctgccttcgggtcgacagctactactactcctgcttcaggtggtctcttcggagcc
tccagcacccctagcagcaccggtacgggctttggtggttttgggtcaaacaccaacact
actgctaccccctctgcttttggcagtaacaccactggcgggggcctattcgggaatgct
aataaaccagcaggcggtttcggaactgcgaacacgggctcgtctctctttggcggcggc
tccaacaccaccactacgggcacgggctttggcaactttggatcgacaaataccctgggg
ggcggcgccagtggcgatcctcccggcacggctgtcactccgttccaggccttcaccgag
aaagagcccaacagcagcaccaatcagtcgaatgccttccagaacatcctgttccaagac
ccctataagaagtggtctgctgatgagctgagattggccgactacgtccaggggaggcga
cacggcaaccccagcggcgctggcgcgtttggagtgagctcaggtttcggcggcggcttt
ggcgcagccaaccagacgagcacacctgcgactggtggttttggagcgacaaacaccaca
ggtggactgttcggatccaacaccaacaccaacaccgcaacctctggattcggcggcggc
tttggtgcaaacaccgctgctagcaacactggtggtggcctctttggcaacgccaacaag
ccaagcggaggactctttgggaacaccacccagcagaaccaaaccggtggtctgtttgga
agcggcaccaccaataccgccacgtctggctttggctcgacaaacaccgctggtggtggg
ctctttggctcggcgaataccgctgcgtccaacaccggcggcggcttgttcggcagcaac
actcagaacaaacccgcaggcactgggttcagcttcgggaacaacccaagcacgacatcg
acaggcttcggaggagccaccaccaacgctttcggctctggcaccaataccactggtggt
gggctctttggcaacgccaacaccagcgcacagccaagtggaggtctctttgggaacacc
gctcagcagcagcaggctccctcgggaggactgtttggccaggctcagacccagcaatct
ggaggattgtttggaaacgctcagcagaaaccagccacgggtggactcttcggctcgacg
cccgctgccaccaacaccggcggcggcctcttcggcggcactcagcagcagggatcgacg
ggcctgggtggcacaaacaccaacaccggaggcctttttggagccaagccagctacgggt
ggcggcctctttggagggaccaccgctgggcaaggcaacactggcggaacaggcctcttc
ggaggtgctggcaccacagctcagactcaacaagctgggggtacaggcctttttgggtca
gcagcgaaccagcagaagcccgggggcctctttggatcgaccccggcggcttcaggtgga
ggactctttggtaacactgcaacgggaactcagggcggcattttcggcaacgctggtggc
cagcagcagcagcaggggcttggcctcggtggctctctgctgggggcctctcagcaagtg
agcaacgcgccccagggactgactgcgaacctcaacgacgtctctgcctacggctcgccg
tccctgttttctggagttagtggaggcgaggtcccgaatccaggtccgctcgctgttccc
ctgagcggacagccgaagcccaagcggccgtcaatcttccccatgtacaagttcaccccc
gcggcgtcaggccgcttcggcactcctcagaagaggggctttggcttttcctacagcaac
tatgggactcctggaggagcaagccctgcaggactctctggcactcccaacactctgggt
cgtagcttgctcggcggcaccggcagcggaacctcccttaccaagagcgtgtcttcgaac
agcctgcgccgcactgtcaatgtcgacgacagcattcttctgcccggtgccttttcaaac
acgaataacacgcgctggtatggaaactcgggctcgaagaagctggttattaaccgcgaa
ctgaggagcgacctcttctccacgccgcaaagggacaggcagaatggcgataatggaacc
ggcccgcgaaagctgtctaagcgggtcagcttcgataccaacgtggacggcgaggactct
cctcctgttcgggcggctctgccagcccctggagatgtgcccgagacccccagcgatgag
actcctcgatccgacaaggcgacgcccgtttcgaacgggctccgaactcccgacatggag
caagtcaagggcaaggataaggaattggccatcgtccaggaggaagagactggcactccc
gagcccccggccaacggatttgacaatgcgcccgggaagtactggatggagcccacgcgg
gaagaaatccagaacatgaatagagttcagcgccagcgggttgacaactttactgttggc
cgagagaacgtcggttccattaccttcaaggtcccggtcgacctcagtggcattgatctg
gatgagctctgcggcggtatcatccagctggagcctcggtccgcgacggtctatcccatt
gcggcgaagaagccgcctgtcggcaagggtctcaatgtgcctgctagaatctcactggag
cagtcctggcctcgtggtggccgagacaagaggatcgccaacgacccgaagcgcttcaac
aagcacattgagcggctcaagcgcattgtcgataccactttcgaaagctacgatcccgag
actggcgtctggaccttctcagtcgagcacttcacgacctacggactggacgactctgac
gacgagaccgagtttgacacgactctcgaccttcctgctgccgccccattgtcgaacatc
gcaccgtcggcagcattccacgcaccagcgtcgtcgcaaggtgacgatgtgatggtgttc
tctcaatcgcacatgctgccgggggcgttcgacgaggaggaaggaatgtttacgactgag
cagactggacagcagtcttttttaggggttagctccgcggactctgccacacatgatgtc
aagctgtcgctggaaaacgagatgaccggcgacgacatcgcagagtatgatatgtccgag
gatgaagacatgacgaggtcttccatcggacagcatctcgccgcggagcatgacgatgcc
tcgtccgagggtggccaggataccaagcggttgaccgcaactcctggtggcatcctcaga
gccagaatgagagccatcaaggactcggctggccccgtcaaactggaagtcgcagacggt
gacgattggatggagatgttgaggaagacggtcagccccatgaagcgggaccgctacctg
ctgagagagctggctgagtctccctataagcaggggggaaagacggtttcgtttgatctc
ggcgatgaggcggactttcggaagtcgtccatctggggcaaaagcttgacccggtctgac
aggaaagatggagctgcgatgagtgcccagattggtatggatcaaggccatggatttgcc
acgagtatcgacctgatgaactccttgtttgagaagccgaagccgaagccggcgcgccgg
gagttgaacgcttctccatctgccaaaggtcttcccaagtccccctacgaacgtcaggct
aaggtcgtcacccccgaagataacgagctagcggctccgtcaaggccaacttgggggccg
gacgagacccttgtcttggttcgatcgcttgacggctcacattcgcgtcggtctatacgc
gacatgacggatatccttacgtttcagcgatccagtatacaaaccgatgaacaggagatt
cgtcttgctacgttcgctgctgagccatccaagaagtatctgcaatcccaggatgtcgta
accgagattcgccttgttgaaggagtgccccaggccaccctgcatgtcacaagcctcaag
agcctgtaccatcacaagagtacgaacgacgcggccagcatccacgagaagcaggtctgg
gagcttgccagcatcttgttcgacgacctggacaaccttggctcgactgacgaggagtat
ttggtgcgccggaacaagctgtctcagttctggtccgacttggtggaacaggcttcatcc
acggccgtcggattggcggccaccagcgaagagaaggcgctcgcatgcctcgctggtcac
cggattcccgaggcctgtaagcatctcctggatggcaaaaacttccgccttgccactctg
ctccccatgatcggcactagcgaagtcgcgaagagggaaatgagagagcagatcaagtcg
tggctggactccaagatgctgtccgagttctccgaggctattcgtaccatttacgaattg
ttgggtggaaatgtgtgtgtgtgcgaaggtctgaagggcgtgcccaacgaggatcgggtc
gattcgtttgtcatctcgaagaagtttggtctggactggaaacaatcgtttggcttgcga
ttgtggtatgccatctcgagtcacgatgacttgtccgtcgctgtcgacagcttcaaggac
gacatcgcccaggataaggaagacttacctcgcccttggtacgttgagcagggcatcgcc
cctctctgggacgacgccaacatcgactcccgccaggacctcctatggggtctgttgcag
ctgtatgccgacgccgacgccgatctggaggctgttctccgccccgagaactcgcagctg
tctcctcttgaggcgagacttcgatggcagctgggccttgccctgacctcgacgggcaag
gtctcgtacggcgcagacggaatcgaaaaggccgatgcagctacccttgcatatgccgcc
cagcttacccgagcaggagagtggcttgaggccgcctttgtgctgctgcacctgcaccac
acggcggcacgcaagaaggctctccaggagcatctctgccagcacgccgacctgatcgga
ttcgaatccgatgccaactttgtcacgctcacggacaagtatcgcgtcccggcagcgtgg
gtctgggaagcgctcgcgctttacatgcggtgtgtcaagaaagatgccgtggccgaagtg
cagtgcctcttgcgagcgggatcgcacgtcgaggcccaccgcatcttggtccagcacgtg
gctcctcaggccatcgttgagcgtgactacgccggcctgtcctctctcatctcgcagttc
caggaccgtcaacaagacattgcagaatggactcagggtggtgagatttacagccacttc
ctccagctgatggagtcccgcagcagaggagaaagcgcaactcctgccctgctggacagg
ctcctcgctggcttgaacgcgatgaaggatgcgggagtggagagcaacattactcgatat
gctgccatttccgacatggcggacgagactgcccgtgagattgtcaagttgacacggcag
aaacaggatatggaacttcgctccagaatcttgagccttcctcttacccaagatcggctg
ctcgcatactcggttgacctgagccttgaccgctacagagaggtcatgtcgcattag
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integrated database retrieval system
