Trichoderma reesei QM6a: TRIREDRAFT_53628
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Entry
TRIREDRAFT_53628 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIREDRAFT_53628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_53628
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_53628
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRIREDRAFT_53628
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
TRIREDRAFT_53628
COMPASS/SET1 complex (yeast)
TRIREDRAFT_53628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
18485579
NCBI-ProteinID:
XP_006961821
JGI:
Trire2_53628
UniProt:
G0R9C9
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MSSTPMDLDPPAGSNGSPSLAISRNLAASAPVSNLSDVVSSFRPTKLLRRDDVKDGRPQP
RVLSIDYDDDGELLMTSASDETIQIYNVREGRHDKSLLSKKYGVKLAKFTHTRSSIIYAS
TKQNHAIRYLATHDNSFIRYFEGHDAAVTGLAVHPGSDNFISCSQDNTVRLWDTQTKHWQ
GQLFLRSPYLAAYDPSGTVFAVACPSSGSVLMYDVRNYDKAPFTTIDIVEQCRSVDSQCL
LKGWTKLEFSNDGKTILVGTKGRGHFLLDAFQGNLKAYLRRPAGGTRRLAAGESLPANGS
APSPTDPGAFESSGECCFAPDGRFVLSGGAKQDVLVWDTLKQPSEGKVLDPTWTLPDKRE
AAVLAFNPRFNFFATADQDLVLWLPDPHA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacgcccatggacctcgaccctcccgccggctcaaacggctctccctcgctc
gccatctcgcggaatctggccgccagcgcgcccgtgtccaacctcagcgatgtcgtgtcc
agcttccgcccgacaaagctgctgcgcagagacgacgtcaaagatggccggccgcagcct
cgcgtcctctccatcgactacgacgacgacggcgagctgctcatgacatctgccagcgac
gagactattcagatctacaatgtccgcgagggccgccacgacaagagcttgctgagcaaa
aagtacggcgtcaagctggccaagtttacacatacccgctccagcataatatatgccagt
accaagcagaaccacgccatccgatacctggctacccatgacaactccttcatccgctac
ttcgagggccacgacgccgcagtcaccggcctcgccgtccatcccggcagcgacaacttc
atctcctgctcccaagacaacaccgtccgcctctgggacacgcagaccaagcactggcag
ggccagctcttcctccgctcgccctacctcgccgcctacgacccctccggcaccgtcttt
gccgtcgcctgtcccagcagcggctccgtcctcatgtacgacgtccgaaactacgacaag
gcgccgtttaccaccattgacattgtggagcagtgccgcagcgtcgactcccagtgtctc
ctcaagggctggaccaagctcgagttctcaaacgacggcaagaccatcctggtcggcaca
aagggtcgcgggcacttcctcctcgacgccttccagggcaacctcaaagcctacctgcgg
cggcccgccggaggaacgcgccggcttgccgcgggcgagagtctccccgccaacggctcc
gcgccctcgcctaccgatcccggcgcgttcgagagcagcggcgagtgctgcttcgcgccc
gacgggcggttcgtgctcagcggcggcgccaagcaggacgtgctggtgtgggacacgctc
aagcagccgtccgagggcaaggtgctggatccgacgtggacgctgcccgataagagagag
gcggcggtcctggcgtttaatccgcgcttcaactttttcgcaacggccgaccaggacttg
gtcctctggctgccggatcctcatgcatag
DBGET
integrated database retrieval system
