KEGG   Trichoderma reesei QM6a: TRIREDRAFT_54349
Entry
TRIREDRAFT_54349  CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K11098  small nuclear ribonucleoprotein F
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIREDRAFT_54349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tre03019]
    TRIREDRAFT_54349
   03041 Spliceosome [BR:tre03041]
    TRIREDRAFT_54349
   03032 DNA replication proteins [BR:tre03032]
    TRIREDRAFT_54349
Messenger RNA biogenesis [BR:tre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TRIREDRAFT_54349
Spliceosome [BR:tre03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TRIREDRAFT_54349
  U2 snRNP components
    TRIREDRAFT_54349
 Complex B
  U1 snRNP components
    TRIREDRAFT_54349
  U4/U6.U5 tri-snRNP components
    TRIREDRAFT_54349
 Complex C
  U2 snRNP components
    TRIREDRAFT_54349
DNA replication proteins [BR:tre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TRIREDRAFT_54349
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18485679
NCBI-ProteinID: XP_006961755
JGI: Trire2_54349
UniProt: G0R8Q7
LinkDB
Position
Unknown
AA seq 90 aa
MSFVPVNPRPMLQDLVDKTVLVRLKWGETEYKGRLVSIDSYMNLQLANTEEYLNEKLTGE
LGQVLIRCNNVLYIRGADQKDSSADVKMEG
NT seq 273 nt   +upstreamnt  +downstreamnt
atgagcttcgtgccggtgaaccctcggcctatgctgcaggacctcgtcgacaagacggtc
ctcgtgcgcctgaagtggggagagacggagtacaaggggagactggtgtccatcgacagc
tacatgaatctccagctggccaacaccgaggagtacctgaacgagaagttgacgggcgag
ctgggccaggttctgatcaggtgtaacaacgttttgtacatccgcggggccgatcaaaag
gacagcagtgcggacgtcaagatggagggttga

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