Trichoderma reesei QM6a: TRIREDRAFT_54736
Help
Entry
TRIREDRAFT_54736 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_54736
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_54736
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_54736
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIREDRAFT_54736
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TRIREDRAFT_54736
mRNA cycle factors
Common to processing body (P body) and stress granule
TRIREDRAFT_54736
Spliceosome [BR:
tre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TRIREDRAFT_54736
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TRIREDRAFT_54736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
18485746
NCBI-ProteinID:
XP_006961904
JGI:
Trire2_54736
UniProt:
G0R7I9
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
GYEGHGGGNHAARGSGDGQWRDGKHIPGPPNPRVERELFGTADDPSKQHTGINFEKYDDI
PVEASGRDVPEPVHQFTTPPLDEHLCRNIEMARYKVPTPVQKYSIPIVMGGRDLMACAQT
GSGKTGGFLFPILSQAFIHGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIYDEAR
KFSYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLD
EADRMLDMGFEPQIRRIVEGEDMPSVADRQTLMFSATFPRDIQMLARDFLKDYVFLSVGR
VGSTSENITQKVEFVEDIDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQSFPA
TSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHR
IGRTGRAGNTGIATAFFNRGNRGIVRELIDLLKEANQEIPPFLEAIARESSFGGGGRGGR
SRPGGGRGNANRDFRKFGGGGFGGSGGGGGGFSNPQQGGFSNYGGQSQGGSNYGGGGYGG
GYGNGGGYGNPGGAGAQSSWW
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ggctacgaaggtcacggcggcggtaaccacgctgcccgtggctctggtgacggacagtgg
cgagacggaaagcacatccctggcccgcctaaccctcgtgttgagcgcgagctctttggc
actgccgacgatccttccaagcagcacaccggcatcaactttgagaagtacgatgacatc
cccgtcgaagcctctggccgcgacgtccccgagcccgtccaccagttcaccaccccccct
ctggacgagcacctgtgccgcaacatcgagatggcccgctacaaggtgcccactcctgtc
cagaagtactccatccccatcgtcatgggtggtcgtgacctgatggcgtgtgcccagact
ggttctggcaagactggtggtttccttttccccatcctgtcccaggctttcatccacggt
ccttctgctgtccccgccaacgctgctggacagtttggccgtcagcgcaaggcttacccc
acatccttgatccttgcccccactcgagagcttgtttctcagatctacgatgaggctcgc
aagttctcgtaccgatcttgggtccgcccttgcgtcgtctacggtggtgccgacattggc
tcccagctccgccagatcgagcgcggatgcgaccttctcgttgccactcctggccgactt
gtggatctcatagagcgaggccgcatctccctgtgcaacattaagtatctcgtgctcgat
gaggccgatcgcatgctggacatgggtttcgagccccagatccgccgcatcgtcgagggt
gaggacatgccttccgtcgctgaccgacagacgctcatgttctcggccaccttcccccgc
gatatccagatgcttgccagggatttcctcaaggactacgtcttcctgtccgtcggccgt
gttggttccacctctgagaacatcacccagaaggtcgagtttgtcgaggacattgacaag
cgctccgtccttctcgacatcctccacacccacgctggtggactgacgctcatcttcgtc
gagaccaagcgcatggccgactctctgtccgacttcctcatcaaccagagcttccctgcc
acctccatccacggagacaggacccagcgtgagcgtgagcgcgctctcgagttcttccgt
aacggacgctgccccatcctggttgccaccgctgtcgcggctcgtggtctcgatatcccc
aacgtcacccacgtcatcaactatgatcttcccaccgatgtcgacgactacgtccaccgt
attggtcgtaccggccgtgccggaaacactggtatcgctaccgctttcttcaaccgtggc
aaccgtggcatcgtccgcgagctcatcgaccttctcaaggaggccaaccaggagatccct
cccttccttgaggccatcgcccgtgagtcctctttcggcggtggtggtcgcggcggccgc
tctcgccctggaggtggccgtggcaatgccaaccgtgatttccgcaagttcggcggcggc
ggctttggtggcagcggcggcggcggcggcggcttcagcaacccccagcaaggcggcttc
agcaactatggtggacagtctcagggaggctccaactatggcggcggcggctatggcggc
ggttatggcaacggcggtggctacggcaatcccggcggtgctggcgcccagtcttcgtgg
tggtaa
DBGET
integrated database retrieval system
