Trichoderma reesei QM6a: TRIREDRAFT_5659
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Entry
TRIREDRAFT_5659 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIREDRAFT_5659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_5659
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIREDRAFT_5659
Spliceosome [BR:
tre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TRIREDRAFT_5659
Complex C
U4/U6.U5 tri-SnRNP related factors
TRIREDRAFT_5659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
AAA_22
DEAD
AAA_19
nSTAND3
T2SSE
AAA_30
Cas3-like_C_2
SRP54
ABC_tran
PhoH
AAA_16
Motif
Other DBs
NCBI-GeneID:
18486025
NCBI-ProteinID:
XP_006968918
JGI:
Trire2_5659
UniProt:
G0RUT4
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MRSRQEYLKKREAERLALLRRQVAEETEELRSGVRLSEREKAEFAKNRELLRLAEERLRI
DDHQDGYVMPEDYITEKGKLDQKKKEEALYKRHVERDEYGQEKFVTEHDEWEREQTTKAK
AQIQGRERENDNYDYVLDDAQYIQWSLDSRMPGERKTLTKEQQFLEAQIEAAEKKALSIQ
ETRKSLPIYQYREQFLQALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQP
RRVAAMSVAARVADEVGVKLGHEVGYSIRFEDCSSEKTILKYMTDGMLLREFMTEPDLAG
YSAIMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFAQYFDDAPIFNIP
GRRYPVDIYYTPAPEANYLAAAITTVFQIHTTQGKGDILIFLTGQDEIEAAEMEIAETAK
KLGNRIKELVICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIVYVIDPG
YVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKFAYMNEMEESPLP
EIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTETLIGALNQLFALQALNHKGELTKIGR
QMAEFPTDPMLAKAVLAADKEGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTV
KEGGDHITLLNIWNQWVDSGFSPIWAKENFLQQRSLTRARDVRDQLAKLCERVEVAPSTC
GANNLRPIKRAITAGFFPNAARLQKSGDSYRTFKNNTTVWIHPSSVLMSVDPPEKTVIYY
ELVQTTKEYMRSVMPIEAAWLAELAPHFHKKKDIEALEDRKMPKKGR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgcgccaggagtatctcaagaagcgcgaggctgagcggctggccctgctgagg
cggcaggtcgccgaggagacggaggagctcaggagcggcgtgcggctgtcggagcgcgaa
aaggcagagtttgctaagaacagagagctgctgcgcctggccgaggagcggctgaggatc
gacgaccaccaggatggctacgtgatgcccgaggactacatcaccgaaaagggcaagctg
gaccagaagaagaaggaggaggcgctgtacaagcgccacgtcgagcgggacgagtacggc
caggagaagtttgtcaccgagcacgacgagtgggagcgggagcagaccaccaaggccaag
gcgcagatccagggccgggaacgagaaaacgacaactacgactacgtgctggacgacgct
cagtacatccagtggagcctggactcgcgaatgccgggcgagcgcaagacgctgaccaag
gagcagcagtttctggaggctcagatcgaggcggcggagaagaaggccctgtctatccag
gagacgaggaagagcctgcccatctaccagtaccgggagcagttcctgcaggctctggag
cagtatcagatcctcgtcatcgtgggtgagacgggcagtggcaagacgacccagctgccc
cagtatctccacgaggccggatacaccaagaacggcatgaaggtcggatgcacgcagcca
cgaagggtagcggcaatgagtgtggcggcgcgtgttgccgacgaagttggcgtcaagctc
ggccacgaggtcggctactcgatccgatttgaagactgctcgagcgagaagacgatactc
aagtacatgacggacggcatgttgctccgagagttcatgacggagcctgatctggcgggg
tactcagccatcatgattgacgaggcccacgagcggacggtgcatacggacattctgttg
gccctggtcaaggatctggcacgagaacggaaagatctgaagctgctcatatcctctgcc
accatgaacgccgaaaagttcgcgcagtacttcgacgacgctcccatcttcaacatccct
ggtcgacggtaccccgtggacatttactacacgcccgcgccagaggccaactacctggct
gccgccatcacaaccgtgttccagattcacaccacgcagggcaagggcgacattcttata
ttcttgacaggacaggacgagatcgaagccgccgaaatggagattgcagagactgcgaag
aagcttgggaatcgaatcaaggaattggtcatctgccccatctacgccaacctgccgtca
gaactccaggccaagatttttgagcccaccccagagggcgcccgcaaagtcgtgctggcg
accaacattgccgagacaagtctgacgattgacggcattgtctatgtcatcgaccccggc
tacgtcaaggagaacgtctacaacccggcgactggcatgtcgaacctggtcgtcgtcccc
tgctctcgagcatccgccaaccagcgcagcggtcgtgccggacgtgtcgggccgggcaaa
tgcttccggctctacaccaagtttgcctacatgaacgagatggaggagtctccgctgccc
gaaatccagcggacgaacctcaacggcgtggtgctgcagctcaagtcgctgggcatcaac
gagctgttggactttgaattcatggatccgcccccgacggagacgctcatcggcgccctg
aaccagctctttgccctccaggctctcaaccacaagggtgagctgaccaagattggccgc
cagatggccgaattccccaccgaccccatgctggcaaaggccgtgctggcagccgacaag
gagggctgcgtcgaggaggtcctgtccatcgtctccatgctgggcgaagcgtccgcgctc
ttcttccggcccaaggacaagaagatccacgccgacagcgcccgcaaccgcttcaccgtc
aaggagggcggcgaccacatcacgctgctcaacatctggaaccagtgggtcgacagcggc
ttctcgcccatctgggccaaggagaacttcttgcagcagcggtccctgacccgcgcccga
gacgtgcgggaccagctggccaagctgtgcgagcgcgtcgaggtcgccccctcgacgtgc
ggcgccaacaacctgcggcccatcaagcgcgccatcacggccggattctttcccaacgcc
gcccggctgcagaagagcggcgacagctaccgcacctttaagaacaacacgacggtgtgg
atccatccgagcagcgtgctgatgtcggtcgacccgcccgagaagacggtgatttactac
gagctggtgcagacgaccaaggagtacatgcgcagcgtgatgcccatcgaggccgcatgg
ctggcagagctggcgcctcactttcacaagaagaaggatatcgaagcgttggaggaccgc
aagatgccgaagaaggggcgatga
DBGET
integrated database retrieval system
