Trichoderma reesei QM6a: TRIREDRAFT_57295
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Entry
TRIREDRAFT_57295 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_57295
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_57295
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TRIREDRAFT_57295
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
TRIREDRAFT_57295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
Spt6_S1
YqgF
SPT6_acidic
Tex_central_region
S1
HHH_9
SH2
HHH_3
Tex_YqgF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
18486124
NCBI-ProteinID:
XP_006963209
JGI:
Trire2_57295
UniProt:
G0RE28
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MSSAMRDLISGEAELDDEEDDESFDEETGEERRRKPSAHIDDSSEEEEDDDDEEEARKIR
EGFIVDEDEEEEEAESDVESRPVKRKREHRNREEEELLDEEDLELIGEQFGEQPKPQAPS
KFKRLKRGHRDEDDAAHEKRGLEEIFADEEDDAAEQRSYGRPGFRSQVDEFDDFIEEDYP
EDEDERIRQQEDAEVARPRDRGVGGVVDTTGLDKDALDDMEAIFGNGEDYDWALQMEEEE
EDREREEQGIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKPFKNLQLTPDQFK
EEARWITNQLWPKKGLAQELQAPFGKAVGKVLEFFIVDEVEVPFVFQHRKDYLLHSKKIR
KSTRDDPDGPDYTIQSDKLLNQDDLWRILELDIKFRSFVEKRNALEKSYDNLKSMDVKDE
MVEEMIPEATTMEEIQDLQDYLQFQYANKLRDLASLSGNTSQTKRPGSKSSLLDRVRNGK
AYYFVKAYGITADQLAKNALRQGRKVAPDDHEQYPMDLADSLTDESFSTGDQVINAARQM
YAEELFASPRMRKYLRASFYQAAEISCRRTEKGLRKIDDTHPYYEIKYIQNQAIADLVHQ
PEVFLKMMRAEEEGLVEIKVEMPSRYDFRRQLYQEFESENFSDRAEQWREERRKVLDLAY
PKLEKIVAKNIKEVIRTFCQDEVLKMCRQEFYRKLDQAPYKPKGMILGTTPRVLVLSNGG
GDPTRDPVCWAWVEEEGRVLEQGKFGNLGRDETQRENFVELVRRRRPDVIGVSGWSADTH
KLVRDLEGLVSEKGLMGAEFEDPETNDYRTELLEVVVVEDEVARLYKDSPRAIAEHPSLN
SVTRYCIALARYLQNPMKEYAALGKDVASLSFHPCQNLLPRDKLMKYLESAMVDTVNMVG
VNINEAMTDPYTANLLPYVAGLGPRKATSVIKTINANGGVVNTRDELVGDPDSGKLPVVG
PRVWNNCASFLYIEYDATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDEN
GPGAIVRKLFKQDEQERVNELVLDEYADQLQRNFSQRKRATLEAISAELQAPYEELRRSF
ALLTPSDIFTMFTGETKSTLCEGMIVPVNVRMVRDDFAIVKLDCGIEGRIEGHEVSNRAS
VKDVLSTGQTVQAKILEMNYKDFMAKLSIREESLRIPYKAPINFGRDGWDYALEAADKEE
LREKDKTTGRTQRVVKHPNFKPFNSIQAEEYLGSQPPGEVIIRPSSKGNDHLAITWKVAD
GVYQHIDVLEMQKETEFSVGKLLRIGGKYTYSDLDELIVDHVKAMARKVEEMMRHDKYQN
RSRSETEKWLITYVDANPNRSAYAFCIDTKHPGYFWLCFKASKTARVIGLPVRTIPQGFE
LRGYQYPDMRALCNGFKLRFQNEFSKMGAR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgcgatgcgtgatttgatctcgggagaggcggagctggatgacgaggaagat
gacgagtcctttgacgaagagaccggcgaggagcgccggaggaagccttccgcccatatc
gatgactctagcgaagaggaagaggacgacgatgacgaggaagaagctcgcaagatccgc
gagggcttcatcgttgacgaagacgaagaggaagaagaggccgagtctgacgtcgagagt
cgacccgtaaagcgaaagcgagagcatcggaaccgagaagaagaagaactactcgacgaa
gaagatctggagctcattggcgagcaatttggagagcagccaaagcctcaggcgccttca
aagttcaaacgcctcaaacgtggccaccgagacgaggacgatgccgcacacgagaagcga
gggttggaagagatctttgcagatgaggaagacgatgccgccgagcaacgcagctatggt
cgacccggcttccgttcccaagttgacgagttcgatgatttcatcgaggaggattacccc
gaggacgaggacgagcgcatacgccagcaggaagatgccgaagtcgcccgccctagggat
cgcggtgtcggaggcgttgttgatactactggccttgacaaggatgccctggatgacatg
gaggccatattcggcaacggcgaagactacgactgggcgcttcagatggaggaagaggaa
gaggacagggagagagaggagcaaggcatcgagctcaaggacgtctttgagccttcacaa
cttaaggagaagctgctcacagacgaggacaacgagattcgattcacggacgagcccgaa
cgcttccaactcgaccgcaaacctttcaagaacctgcagctcactcctgatcagttcaaa
gaagaagctcgatggattaccaaccagctgtggccgaaaaagggcttggcccaggaactt
caggctcctttcggcaaggcagttggtaaggtcctcgagttcttcatcgtggacgaagtc
gaggtgccatttgtgttccagcaccgcaaggactacctcctccactccaaaaagatccga
aagtccacaagagacgaccccgacggtcccgattatacgatccagtcagacaagctgctg
aaccaggatgacttgtggaggattctcgagcttgacatcaagttccgctcctttgtggag
aagcggaatgcgcttgagaagtcgtacgacaacctcaagtccatggatgtcaaggacgaa
atggtcgaggagatgatccccgaggccacgactatggaagagattcaagatctgcaagat
tacctgcagttccagtacgccaacaagctgcgagatctcgcttctctctccggcaataca
tcacaaacgaaacgcccgggctcaaagtcttcactgctcgatcgtgttcgcaatggcaag
gcgtattactttgtcaaggcatacggcatcactgctgatcaactggcgaagaacgctctt
cgccagggccgaaaggtggcgccggatgatcacgagcagtacccgatggatcttgctgac
agcctaaccgatgagagcttcagcaccggcgatcaagtcattaatgctgctcgtcagatg
tatgccgaggagctctttgccagccctcggatgcgcaagtacctcagagcatccttctac
caggcggctgagatcagctgtcgccggacggaaaagggacttcggaagattgatgacaca
cacccgtactacgaaatcaaatatatccagaaccaagccattgcggatttggtccaccag
cccgaagtattcctgaagatgatgcgcgccgaggaggaaggcctcgtggagatcaaggtc
gagatgccttcgcggtacgatttccgcagacaactataccaggaattcgaatcagagaac
tttagcgatcgagcagagcagtggcgagaggagcgcaggaaggtgctggacctcgcctat
cccaagctggagaagattgtggccaagaacatcaaggaagtcatccgaaccttttgccaa
gatgaagttctcaagatgtgccggcaagagttttaccgcaagcttgaccaggctccttac
aagcccaagggcatgatcctgggaaccacaccgcgggtcttggtcctgtccaatggaggt
ggtgatcctacacgcgaccctgtgtgctgggcttgggtggaagaagaaggccgtgtgctt
gaacaaggcaagtttggcaacctcggccgagacgagactcagcgcgagaactttgtcgaa
cttgtacgacggcgacggcccgatgtcattggtgttagtggctggtcagcggatacgcac
aagcttgtccgcgacctggagggcctggtgagcgaaaagggcctgatgggagcagagttc
gaggaccccgagacaaacgactaccgaaccgagctgctcgaggtcgtcgtcgtcgaggac
gaagtcgcacgcctatacaaggacagccctcgcgccatcgccgagcacccctccctcaac
tccgtcacaagatactgcattgccctggcgcgatatctgcagaacccgatgaaggagtac
gccgcactgggcaaggacgtggcgtctctctcatttcatccatgccagaacctgctgccc
cgggacaagctgatgaagtacctagagtcggccatggttgataccgtcaacatggtcgga
gtgaacatcaacgaagccatgacggacccgtacacagccaaccttctcccctatgtcgca
ggcctgggcccgcgaaaggccaccagtgtcatcaagaccatcaacgccaacggaggcgtc
gtcaatacgagagacgagctggtgggcgacccggatagcggcaagctgcccgttgttggg
cctcgcgtctggaacaactgtgccagtttcctgtacatcgaatacgatgcgacgaatccc
tcatcagaccccctcgacaacacccgtgttcatccggaagactacgagctgggccgcaag
atggcggcagatgcgctcgagctggacgaagaggatgtcaaggcggagactgacgagaac
ggacccggcgccattgtgcgaaagctctttaagcaagacgagcaggaaagggtcaacgaa
ctggtgctcgatgagtatgccgaccagctgcagaggaactttagccaacgcaagcgagct
actctcgaggccatcagtgccgaattgcaagcgccctacgaggagctgcgaaggagtttt
gcgctccttacgccgtccgacatcttcaccatgttcacgggcgaaaccaagtcaacactc
tgcgaaggcatgattgtcccagtcaatgtgcgcatggtcagagatgactttgccattgtg
aagctggattgcggcatcgagggcaggatagagggtcacgaggtgtcgaaccgggcttcc
gtcaaggacgtcctcagcacaggacaaacggtgcaagccaagatccttgagatgaactac
aaggactttatggccaagctctcgatacgggaggagtctctgcgcatcccctacaaggcg
cccatcaactttggccgcgacggctgggactatgccctcgaggctgccgacaaggaggag
ctgcgcgagaaggacaagaccacgggccggacgcagcgcgtggtgaagcatcccaacttc
aagccctttaactccatccaggcggaagagtacctgggctcacaaccacctggcgaagtc
attattcggccgtcgtccaaaggcaacgatcacctggctattacctggaaggttgccgat
ggcgtctaccaacatattgacgtgctggaaatgcagaaggagactgagttttccgtcggc
aaacttcttcgaatcggcggcaagtacacgtacagcgatctcgacgagttgatcgtggac
catgttaaggccatggccagaaaggtcgaggagatgatgaggcacgacaagtaccagaac
aggtcgcgcagcgagactgagaaatggctcatcacatacgtggacgccaaccccaaccga
tcggcttacgccttttgcatcgacaccaagcatccgggatacttttggctgtgcttcaag
gcgagcaagacggcgcgcgtcatcggcctgccggtgcgaaccattcctcaggggttcgag
ctgagaggataccagtaccccgacatgcgcgctctgtgcaacggtttcaaactgcgcttc
cagaacgagttttccaagatgggggctcgctaa
DBGET
integrated database retrieval system
