Trichoderma reesei QM6a: TRIREDRAFT_57488
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Entry
TRIREDRAFT_57488 CDS
T02991
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03440
Homologous recombination
tre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRIREDRAFT_57488
03460 Fanconi anemia pathway
TRIREDRAFT_57488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_57488
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_57488
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TRIREDRAFT_57488
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Topoisomerases
TRIREDRAFT_57488
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
TRIREDRAFT_57488
FA (Fanconi anemia) pathway
TRIREDRAFT_57488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
18486147
NCBI-ProteinID:
XP_006963403
JGI:
Trire2_57488
UniProt:
G0RCU8
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MRVLCVAEKPSISKAVAGHLSGGSFTTHNTRNKYIKNYSFDFDFGQQWGSSSVTMTAVTG
HLTNVEFTSEYKNWSHPPPESLFAAPIVTNVHDDKKDIAKNIADQAKYARLLVIWTDCDR
EGEHIGQEIVDAAKKGNASIQVKRARFSNVERAHVLSAARRLVELDEKQVNAVAARIELD
LRIGYAFTRFLTNNLKQLGGPLADLVLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGISL
THNKDGKQVRFSWARNRLFDRMTVVILYERCLAAKKAKVTKVQEKPTRKFKPLPLTTVEL
QKAATRLLRMSGQQAMTIAEGLYNKGFISYPRTETDRFDKGMNLRALVQKQATDQRWGTY
AQGLVNGGFRQPREGKHDDKAHPPIHPIAHVAPSALSYDEGRLYEYVVRRFLACCSEDAQ
GMATDIDVQFGDERFSTRGVIVLERNYLDVYIYENWTNTTELPRFTVGEQFEPTEAMMTE
GKTSPPNYLTEADLIALMDANGIGTDATMAEHIQKIQDREYVATTTRGGTTAADGDDEEH
DEAPAARGGRGRGRGRGGRGRGGGGSTRGGSGSGIKVFVPTQLGVALILGFDRMSFETSL
GKPFLRKEMELQMKAICQGSTTRREVLDRSIAQYKQVFLQSQEQVGVLKQACREFIFGQG
PRA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcctctgcgtggctgaaaagccatccatctccaaggcggtggctggccatctc
tccggaggctcctttacaacacacaacacccgcaacaaatacatcaagaactactccttt
gactttgactttggccagcaatggggatcctcgtccgtcaccatgaccgccgtgactggc
catctgaccaatgtcgagttcaccagcgagtacaagaactggagccatcctccaccagag
tcgctctttgccgcgccgatagtgaccaacgtccatgatgacaagaaagacattgccaag
aacatagcagatcaagccaaatatgcgcggctgctggtgatatggaccgattgtgatcga
gaaggggagcacattggccaagagattgtcgacgcagccaaaaagggcaatgcctctatc
caagtgaaacgtgccagattcagcaacgtcgagcgagcgcacgtgctgtcggctgccaga
cgtcttgttgagctggacgagaagcaggtcaacgctgtcgcggcaagaatcgaactggat
ctccgtatcgggtacgcttttacgcgcttccttacgaacaatctcaagcaactaggtgga
ccactggcagatttggttctgagttacgggtcctgccagttcccaacgctgggcttcgtt
gtggaccggtactttcgtgtcaagaatttcgtgcccgagcctttctggggcatttcattg
acgcacaacaaagatggcaagcaggttcgattttcttgggctcggaatcgtctctttgac
cgcatgacagttgtgattttgtatgagaggtgccttgctgccaaaaaggcaaaagtcaca
aaggtgcaagagaaaccaacccgaaagttcaagccactacctctcaccaccgtcgagctc
caaaaagcggcaactcgcttgctgcgaatgtctggccagcaggccatgacgattgccgaa
ggcctatacaacaaaggattcatcagctatccgaggacagaaaccgaccgcttcgataaa
ggcatgaacctgagggctcttgtccagaaacaggcgacggatcagcgctggggcacgtat
gctcagggtctcgtcaacgggggctttcgacaaccgagagagggaaaacatgacgacaaa
gctcaccctccgatccatcccatcgcgcatgtggcaccaagcgcgttatcctatgatgag
ggacggctctatgagtatgtggtgcgccgcttcttggcatgctgttcggaagacgctcaa
ggaatggcgacggatattgacgtccagttcggggacgaacggttcagtacacgaggggtt
attgtgctcgaaagaaactacttggatgtctacatctacgaaaactggaccaataccaca
gagctgccgcgattcaccgtcggtgagcagttcgagcccaccgaagcaatgatgacggaa
ggcaaaacatcaccgccaaactatctcacagaggcggatctgattgctctcatggatgcc
aacggcattgggacggatgccacaatggctgagcacatccaaaagattcaagatcgagaa
tacgtggcaactacaacgagaggaggcacgacggccgcagatggtgacgatgaagagcat
gacgaggcaccggctgctcgaggcggacgtggacgtggacgtggaagaggtggccgaggt
cgaggaggcggcggctcaacgagagggggcagtggcagcggcatcaaggtcttcgtccca
actcaacttggagtggcccttattctgggcttcgaccggatgagcttcgaaacgagcctt
ggaaagccctttttgcgcaaagaaatggagcttcagatgaaggccatttgccaaggcagc
accacacgccgggaggttcttgaccgaagcatagcgcagtacaaacaggtgtttctgcag
tcccaagaacaagtaggagtccttaagcaggcctgccgcgagtttatctttggccaaggg
ccgagagcatag
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