Trichoderma reesei QM6a: TRIREDRAFT_57494
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Entry
TRIREDRAFT_57494 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRIREDRAFT_57494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_57494
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRIREDRAFT_57494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
GNC1_N
Motif
Other DBs
NCBI-GeneID:
18486148
NCBI-ProteinID:
XP_006963251
JGI:
Trire2_57494
UniProt:
G0RD17
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MATSLAQQLAQVAANSKSSLDIKAQRAAHSKSLIWEPRVAAAQSYQTLYATCHQGFEELC
QLDARFNPFQQTLFSEQSQDQDRNQLTIAENAELDRHIEAFLRLVGSRLRLMPAIKAVEW
LIRRFNVHVDNTSILLMTFLPYHSITAFATLLSILPPKIPSQFRFLDPYIRSLTPPPRSV
IVHHTIHHVDFLVAVSEYTLESCRKGYQYPALITFWGGLITESVSGILDRTKSGRAAVQS
DNSQALLHRLGPIFAESLVMKKVPSLQIASYMAMTVFVSKGDLHDNAVTALMQQLVHGWT
ADTVRAGLVCLTILAQFRSAKQMSSKVTRALMKVQDIGSLLVEIGRERRVDKLANGLCLA
LVERLVKKGDSRGLATITTILGGNILKDKQVSVIFKSLLLTAHELNDENDKDGSLRRDVG
STLISLSQTTGSAGAIIQSVIEEVKFDIEELEMKLDLVFRTRKLPEYAREDEGGDSAVQA
QLSQNPEASLAELASTSESLSSSLVSDGDALFFKLSDVFVSIVSDQTPRKTELLGQFDQF
PKLKRDSALEDCTYFSFFIRIWCGLYPALARTAALDMVRNRLKAATESAVDIQALIPYCV
AALGDPSKRVRQAAADLITVAAGFYKPPFAKKSTNAWGAESLYGKAKSKEVAALGVDVAC
RFLQLQLLPAIEECVMDPEHISAVLKSAIETGKYQVAPEPSLDKKDHLSHSGRQALLTTF
ASHIVATPLMLVKSRLLKSLNDIRGVSNVTRTQLLLPALQWWASLTDAEATETCASQQLD
KAVLDAQFIDIIVPNDPAGLEFVFTLLKDKANDARPGLIRAAFSRIKKMWPAMKDEMKFM
VAEQFLELSQEAESPSSGATESIIPAEAADLLRSVTLTTDILSFFLDSIQTGTKMITEPP
PNKRRRTSSSDANRGLNTQVTPELSRALRKVTFVLQIVDSSDPVSHPELLDGLFTALSEL
QYFRTVVGSELGYLQNLILRSLLAMMPAYKANKDLKVDSSGGYGDLLVNCIQKSSSPVVQ
NAALLLIANLATIAPHLVLHSVMPIFTFMGTSVLRQNDDYSAHVVAQTIKEVVPPLIDSL
RQGQKSPVAGASDILVSFTTAYEHIPVHRRHGLFLALVETMGPKDFLFTLVAMLVDRYEL
SDDLLQFVLELLNAFSIEVQLETLVKLLDLTSDFFKPKPGLSLVLLGSGDESEEKDVEKI
ALRQLSVLPSLLANRKLKAQISKLANRDDMETSEVRQLYATLLEDVLVLADTVKANKSLH
SRCGNALANLLNLLSIGEFIKAVESLLDRPNLDLRQKVLRALELRVGSESNTDVASRTAL
LAFLPQLTAAIRESSDIRYKHTAVTCVDKIAEKYGKKDIEAVVAAASTIAGEHCLGQDEK
QLRVMALLCLTSLVDVLQDAIVPVLPVALPRAVAYLNLSLQEDARDEELHAAGYGFISAL
AEHLPYMLSTYLGQILEVSNKSAEAGLDAETNEARVSCLEFFAKKLEAKEIFTSLDSNWE
SATSSGFSATSDYIDMLGMAIDKHPKSAITKNAGVLSSILLKAFDLRRQIIAKGEASDAV
LARVASLEEKMNDKALKMIYKLNDAAFRPIFVQIIEWSSAGLSKDKAGLAARRYSVYGFL
QTFFDSLKSIVTNYATYVLEDAVKILGTVDPKVAGEKQLWSRVLKTLAKCFEHDQDDFWQ
APSHFGAIAPVLMEQFAHAVSVDVEEALIPTTVELAAAADSQAHQKELNSALLKHLRSEK
AAIRLAAVKCEQALTDRLGEEWLSMLHEMLPRISELQEDDDEVVERETHRWIVKIEGVLG
ESLDAMLQ
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgctcgcccagcagctggcgcaggttgccgcaaactccaagtcgagcctg
gacatcaaggcgcaaagggctgcacactcaaagtcgctgatctgggaacctcgagtcgcc
gccgcgcagagctaccagaccctgtatgccacatgccaccagggcttcgaagagctctgc
cagctcgatgctcggttcaatcccttccaacaaacgctctttagcgaacagagccaggac
caagaccggaatcagctcacaattgccgagaatgcggagctggatcgtcacatcgaggcg
tttctgcgactcgtgggcagccggttgaggctgatgcccgccatcaaggccgttgagtgg
ctgattcgacgattcaacgttcatgtggacaacacctcgattctgctcatgaccttcttg
ccataccactccattaccgcattcgcaaccctcctctcgattctaccaccaaaaatcccg
agccagtttcggttcctcgatccctacattcgatcactcacgccgcctccccgatcagtc
atcgtccaccataccattcaccacgtcgacttcctcgtcgccgtgtccgaatacaccctc
gaatcgtgccgtaaaggataccagtacccggctctcatcaccttctggggtggtctcatt
accgagtccgtgagcggaatcctggatcgcaccaagtctggccgagcagcggtacagagc
gacaacagccaggcgctgctgcacagactcggccccatctttgccgagtcactggtcatg
aagaaggtccccagccttcagatcgcctcatacatggccatgactgtctttgtatcaaag
ggcgaccttcatgacaatgccgtcacggcgctgatgcagcagctggtccacggttggact
gccgacactgttcgagccggcctggtatgcttgacgatactggcccagttccgatccgca
aagcagatgagcagcaaagttaccagggctttgatgaaggtccaggatattggtagcctt
ctcgtcgagattggacgcgagcgccgtgtggacaagctggccaacgggctgtgcttggcc
ctggtggaaaggctggtgaagaagggcgattcgcgaggccttgcgacgatcaccacgatt
ctgggcggcaacatactaaaggacaagcaggtttccgtcatcttcaagtcgctgctcctc
accgctcacgagctcaacgacgaaaacgacaaggacggatctctgcgcagagatgttggc
tctaccctcatttccttgtcgcaaactacaggatcggccggcgccatcattcaatcggtc
attgaggaggtcaaattcgacattgaggagctagagatgaaactggatcttgtgttccgc
acgaggaagctgcctgaatacgcgagagaggacgagggaggtgactctgctgttcaagcg
cagctatcccagaaccctgaggcaagccttgccgagttggccagcacttcggagtccctc
tcttcttctctcgtgtcggacggtgatgcactcttcttcaagctcagcgacgtattcgta
tcaattgtctccgatcagacaccacggaagacagaacttctcggccagttcgatcagttc
cccaagctcaagcgggattcggcgctcgaggactgcacatactttagctttttcatccgc
atctggtgcggcctatatccagccctcgcgcggactgcagcattggacatggtcaggaac
cgactgaaggctgcaaccgagtctgccgtggatatccaagctctcatcccttactgtgtt
gccgctctgggcgacccttcgaaacgcgtgcgccaagcagcagcggatctcatcaccgtc
gcagctggcttctacaagcctccctttgccaagaagtcgacgaatgcatggggcgccgag
tcactgtatggaaaggccaagtccaaggaggttgccgccctgggcgtggatgtcgcctgc
agattcctccaacttcagcttctcccggctatcgaggagtgcgtcatggatcctgagcac
atctctgcggtcctcaaatccgccattgagactggaaaatatcaagtcgcccctgagccg
tcactggacaagaaagaccacctatctcactctggccgacaggcgctgctgacgaccttc
gcctctcacatcgttgctactccgctgatgcttgtcaagagtagactgctcaagtctctc
aacgacatccgcggcgtttcgaacgtgacacgcacacagctccttctgcccgctctgcag
tggtgggccagcctgacagatgccgaggcgactgagacctgcgcctctcagcagctggac
aaggcggtcttggacgctcagttcatcgacatcattgttcccaacgacccggccggactg
gaattcgtcttcactctgctcaaggacaaggccaacgacgcaaggccgggcctcatccga
gccgccttctcccggatcaagaagatgtggcctgcgatgaaggatgagatgaagttcatg
gtggcggagcagttcctggaactctcacaagaggcagagtctccttcctctggcgccacg
gagtccatcatcccggccgaggctgccgatctgctccgctccgtgactctgacgaccgac
atcttatccttcttcctcgactctatccagacaggcaccaagatgatcaccgagcctccg
cctaacaagcgcaggcgaacgagctcttctgacgccaatcgtggcctgaacacacaggtg
actccggaactgagtcgcgcattgcgcaaggttacctttgtgctgcaaatcgttgacagc
tcggatcccgtgtcacatcccgaactgctcgacggcctctttacagccttgtctgagctt
caatactttaggaccgtagtcggctcggagttgggctacctgcagaacctgatcctgcgc
agcctgctggccatgatgccggcctacaaggccaacaaggacctcaaggtggacagctct
ggtggctacggagacctgctcgttaactgcatccagaagtcgtcgagcccagttgtccag
aacgccgcgctcttgctgattgccaacctggccaccattgcgccacacctggtgctgcac
agcgtcatgcccatcttcaccttcatgggcacgtcggtgcttcgccagaacgacgactac
tctgctcacgtcgtagcgcagaccatcaaggaagttgtgcctccgctcatcgactcactg
cggcagggccagaagagccccgttgctggcgcttccgatatcttggtgagcttcacgacg
gcgtacgagcacattccagtgcaccggcgacatggcttgttcttggcactggtcgagacc
atgggacccaaggactttttgtttacgctggtggccatgcttgtcgaccgatatgagctg
agcgacgacctgcttcagttcgtcctcgagctcctcaacgcgttcagcatcgaagtccag
ctcgagacattggtcaagctgctggatctcacttcggatttcttcaagcccaagccgggc
ttgtcgctggtgctgctcggcagcggtgacgagagcgaggagaaggacgttgagaagatt
gcccttcgccagctgtccgtgctgccgagcctcctggccaaccggaagctcaaggctcag
atcagcaagctcgccaaccgagacgatatggagacatcagaggtccggcagctctatgcg
accctgctggaggacgtcctggtgcttgccgacacggtcaaggcgaacaagagcctgcac
agccgatgcggaaatgccctggccaacctgctcaacctgctttctattggcgaattcatc
aaggccgtggaaagcctgctcgacaggcccaacctggacctgcgccagaaggtgcttcgc
gccctggaactccgggtgggatcggagagcaacacggatgttgcgtcaagaacagccctg
ctcgcctttttgccacagctcacggctgccattcgggagtcgagcgacatccgctacaag
cacacagcggtcacttgcgtcgacaagattgccgaaaagtacggcaagaaggatatcgaa
gctgtggttgcagccgcgtcaacgattgccggggagcactgccttggccaagacgagaag
cagcttcgcgtcatggccctcctctgcctcacgtccctggtcgacgtgctgcaggacgcc
attgtgcccgtcctacccgttgcccttcctcgagctgtcgcctatctcaacttgagcctg
caagaggatgcgcgcgacgaggagctccatgcagccggctacggattcatcagcgccctg
gccgagcatttgccgtacatgctgtccacctaccttggccagatcttggaggtctccaac
aagtcggcggaagccggccttgatgcggaaaccaacgaggcccgtgtcagctgcctcgag
ttctttgctaagaagctggaggccaaggaaattttcacgagcttggattcgaactgggag
agtgccacttccagcggattctcggctacgtctgattacattgatatgctgggcatggcc
atcgacaagcaccccaagtctgccattaccaagaacgccggagtcttgtcgagtatcttg
ctgaaggcatttgacctgcgaaggcagattatcgccaagggcgaggccagcgacgcagtg
ttggcccgtgtcgcttctctggaggagaagatgaacgacaaggcgctgaagatgatctac
aagctcaacgatgccgccttccgccccatctttgtgcaaatcatcgaatggtcgagtgcc
gggctttccaaggacaaggccggattggccgctcggcgatacagcgtctacggattccta
cagacgttctttgacagtctcaagtcgatcgtgaccaactacgccacgtacgtgctggag
gatgccgtcaagattctgggcaccgtcgaccccaaggttgccggcgagaagcagctttgg
agccgcgtcctcaagacgctggccaagtgcttcgagcacgaccaggacgacttctggcag
gcgccttcgcactttggagccattgcccctgtgctgatggagcagtttgcccacgccgtg
tccgtcgacgtggaagaagccctgatcccgacgactgtcgagcttgcggcagcagcagac
tctcaggcgcaccagaaggagctcaactcggcgctgctgaagcacctgcggtcagaaaag
gcagccatcaggctggctgccgtcaagtgcgagcaggcgttgacggaccgactgggcgag
gagtggctgtcgatgctgcacgagatgctgccccggattagcgagctgcaggaagacgat
gatgaggtggttgagcgggagacgcacaggtggattgtcaagattgagggcgtgctgggc
gagagcctggatgccatgctgcagtaa
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integrated database retrieval system
