Trichoderma reesei QM6a: TRIREDRAFT_58076
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Entry
TRIREDRAFT_58076 CDS
T02991
Name
(RefSeq) apurinic/apyrimidinic endonuclease-like protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRIREDRAFT_58076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_58076
Enzymes [BR:
tre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TRIREDRAFT_58076
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TRIREDRAFT_58076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
HpaB_N
Motif
Other DBs
NCBI-GeneID:
18486234
NCBI-ProteinID:
XP_006963144
JGI:
Trire2_58076
UniProt:
G0RDC3
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MPRLTRGSQKATVKREAKEEDEDVKDMDSKPAKPIARTAAKRKAADSQQDAEEPLEQQKN
KKQRKTKAQIKAEEEAMVLAERTAVSSLTRAMYIGAHVSAAGGVQNSVTNAVHIGANSFA
LFLKSQRKWANPPLTPESQAGFVSQCKQHHYHANEHVLPHGSYLVNLAQADAEKAKQAYD
SFVDDLARCEQLGIRLYNFHPGSTGGDTKAAAIGRIAAQLNKAHKATKTVVTVLENMAGS
GNVVGSTWQDLRDIIALVEDKARVGVCIDTCHAFAAGYDLRSPEAFKETMDSFNDIVGAK
YLKAFHLNDSKAPLNSNRDLHANIGTGFLGLRAFHNVMNHPDFQHKPMVLETPIERKTPD
GKTVEDKQVWADEIKLLESLVGMDPDTKEFARLEAELQDKGAEERRRIQEQVDKKATKGV
KKKRGSKVKKEETSDEESG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggctcaccagaggcagccaaaaggcaaccgtcaagcgcgaagcaaaagaagaa
gacgaagacgtcaaggacatggactccaagccagcaaagcccatcgccagaaccgcagca
aagcgaaaagcagcagattcacaacaagatgccgaggaacctcttgagcagcagaagaac
aagaagcagcgcaagacgaaagcacagatcaaagcagaagaagaagccatggtcctggca
gaacgaacagccgtgtcttccctgacgagggcaatgtacattggcgcccacgtcagtgcc
gcaggaggcgtccagaactccgtgaccaacgccgtccacattggcgcaaactccttcgcc
ctgttcctcaagtcccagcgcaaatgggccaaccctcccctgacgcccgagtcccaagcc
ggcttcgtctcgcagtgcaaacagcaccactaccatgccaacgagcacgtcctcccgcac
gggtcatacctggtgaacctggcgcaggccgacgcggagaaggccaagcaggcatacgac
agcttcgtcgacgacctcgcgcggtgcgagcagctgggcatcaggctgtacaacttccac
ccgggatccacggggggcgacaccaaggccgcggcgattgggaggatcgccgcgcagctc
aacaaggcgcacaaggccaccaagacggtcgtcacggtgctggagaacatggcgggcagc
ggcaacgtcgtggggtccacgtggcaggatctgagggacattatcgctcttgtggaggac
aaggcgcgggtgggcgtgtgcatcgatacgtgccatgctttcgccgccggctacgacctg
cggagtcccgaggcgttcaaggagacgatggattcgttcaacgacattgtcggcgcaaag
tatctcaaagccttccacctaaacgacagcaaagcccccctcaactccaacagagacctc
cacgccaacatcggcaccggcttcctcggcctgcgcgcctttcacaacgtaatgaaccac
ccggatttccagcacaagcccatggtcctcgagacgcccatcgagcggaagacgcccgac
ggcaagacggtcgaggacaagcaggtctgggccgacgagatcaagctcctcgagagcctc
gtcggcatggaccccgacaccaaggagtttgcgaggctcgaggcggagctgcaggataag
ggcgcggaagagaggcgtaggatccaggagcaggttgacaagaaggcgactaagggggtg
aagaagaagaggggttccaaggtgaagaaggaggagacgagcgatgaggagagcgggtag
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