Trichoderma reesei QM6a: TRIREDRAFT_58213
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Entry
TRIREDRAFT_58213 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TRIREDRAFT_58213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_58213
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
TRIREDRAFT_58213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
Motif
Other DBs
NCBI-GeneID:
18486255
NCBI-ProteinID:
XP_006963222
JGI:
Trire2_58213
UniProt:
G0RCV3
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MADKEATVFIIDLGASMAAVNGGREESDLDWSMSYVWDKISNVVASNRKTLCVGVVGFRT
DETNHTLSEDGYENISILQPLGPMSMSSLKALQPKVKPSRTVEGDAISAIVIAVDMIDKY
TKKNKWKRQISCEGVDFDAPDYGFKEEDKPSVKKQNEETLKKLVDGCGDDSRFASMVEAI
DDLNEPRAKSVKPYKTYEGLLTLGDPKNAPAVVEIRVERYFKTHLARPPAASTVVVKEEQ
AGPSQADEDEQMDGAELTAVRQARTYKVNDPDAPGGKRDVEFESLAKGYEYGRTAVHISE
SDQNVTKLATEKSFKIIGFVQKEKYEMLLNLGETCVTVASKYDEKSELAFSSLVWALSEL
DAYAVARLVTKDQKDPMLVLLMPYMEPDYVCLYDVPLPFAEDIRTYQFPPLDRVVTVSGQ
TLTNHRLLPSDELNQAMSDYVDAMDISSYGIDEDGQPAEYATIDELYNPAIHRIGHAIKQ
RAIHPEKPVPEIPPVLLRFAAPPTELVETVQPHIDALIHAADVKKVPPKAKGKRQRETVK
PISGLDVDALLGEEQKGSISPENAIPDFKRALNSSEEVEQIADATKQMGAIVRSLITDSF
GDSKYAQAMEGIGAMREELINLEEPGLYNDFVRDLKKSLLSGALGGDRRDFWFKMRWAKL
GLIDKKQSEVSSVTLEEADEVSGAACCRIIRTLFANLWDSFTSRGEVSTLTKNGTMYMSG
VTTESCALSIV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcaaccgtcttcatcatcgacctcggcgcgtccatggcagctgtc
aatgggggtcgagaagaatccgaccttgattggagcatgagctacgtctgggacaagatc
agcaacgtcgtggcctcgaatcgcaagacgctgtgcgttggcgtcgtggggttcagaacc
gacgagacaaaccacacgctgagcgaggatgggtacgagaacatctccatattgcagccc
ctggggccgatgagcatgtccagcctcaaggctcttcagcccaaggtgaagccgagcagg
acggtggaaggcgatgccatctcggcgattgtcattgccgtcgacatgattgacaagtac
acgaagaagaacaaatggaagcggcagatttcttgtgagggcgtcgactttgatgctccc
gattacggcttcaaagaggaggacaaaccttcagtcaagaagcaaaacgaagagacccta
aaaaagctcgtggatggctgtggcgacgactcaaggttcgcctccatggtcgaggccatt
gacgacttgaatgagccacgagcaaagtcggtcaagccttacaaaacgtacgaaggtctc
ttgaccttgggagatccgaaaaacgctcccgcagtggtggaaatccgcgtcgagagatac
ttcaagacccatctagccaggccacctgccgccagcaccgtggtggtcaaggaggagcaa
gctgggccgtctcaggcagacgaggacgaacagatggacggagcggaacttacagctgtg
aggcaggccaggacatacaaggtcaatgatccagatgcccctggcggtaagcgtgacgtt
gagtttgagtctctggccaaagggtacgagtacggcaggacggcagtccacatcagcgag
tctgatcaaaacgtcaccaagctcgcgacagaaaagagcttcaagatcatcggcttcgtc
cagaaagaaaagtatgaaatgctccttaatcttggcgaaacctgcgttaccgttgcatcc
aagtacgatgaaaagtctgagctggcttttagctctctggtgtgggcgctctcggagctc
gacgcctacgccgtggcccgcctagtaactaaggaccaaaaggaccccatgctggtgtta
ctgatgccgtatatggagcctgattatgtttgtctctatgatgtgcctctgcctttcgca
gaggacatcaggacgtaccagtttcctcccttggacagagtcgttaccgtcagtggccaa
acgctcaccaaccatcgcctattgccatccgacgagctcaaccaagcgatgagcgactac
gtagatgccatggacatttcaagttatggtatcgatgaagatgggcaaccggctgaatat
gccaccatcgatgagttatacaaccctgcgatacatcgcataggccatgcgatcaaacaa
cgagcgatccacccagagaaacccgtgcccgagatccccccagtcttgcttagattcgca
gcacccccgacagaactcgtcgagactgtgcagcctcatatcgatgcactgattcacgct
gcagacgtgaagaaagtgccgcccaaggccaagggcaagcgccaaagagaaacagttaaa
cccatctcgggactggatgtggatgcccttctgggagaagagcagaaaggttccattagt
ccggagaatgccattccggacttcaaacgagccctcaactcgtccgaagaagtcgagcag
attgccgacgccacaaaacaaatgggggccattgtgcggtctctcattacggacagcttc
ggggatagcaaatatgcccaggcaatggaaggcattggtgcgatgcgtgaggagctgatc
aacctggaagagcctggcctgtacaacgactttgtgcgcgacttgaagaaaagtttgcta
tctggagccttgggtggtgacaggcgagatttctggttcaagatgaggtgggcgaagctg
ggcctgattgacaagaaacagtcggaggtgtcttcggtcactcttgaggaggcggacgag
gtgagtggtgcagcatgctgtcggattatacggacgttgtttgctaacttgtgggatagt
tttacaagtcgaggtgaggtatctacgttgaccaagaatgggaccatgtatatgagcggt
gtaacaacagaatcctgtgctttgagcattgtatga
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