Trichoderma reesei QM6a: TRIREDRAFT_59147
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Entry
TRIREDRAFT_59147 CDS
T02991
Name
(RefSeq) DNA lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_59147
Enzymes [BR:
tre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TRIREDRAFT_59147
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TRIREDRAFT_59147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
18486424
NCBI-ProteinID:
XP_006964368
JGI:
Trire2_59147
UniProt:
G0RGJ4
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
RNPFGYQPWREKRTFQAMFDLLEADIVVLQETKIQRKDLTDDMVLVPGWDVYFSLPRHKK
GYSGVAIYTRNATCAPIRAEEGILGVLCPPKSTTQFRNLPDDQRIGGYPRPEQLSGNIDE
LLLDSEGRCVILEFPAFVLLGVYSPANRDESRVEFRMEFLQALDARVRNLVAEGKEVILA
GDLNVSRAEADSTNIVENLRKEGLSMEEWMNLPSRRLFNHLVFGGTVQGERDVGREQPVL
WDLCREFHPAREGMNTCWDTKRNTRPANNGSRIDYVLCSHGLRDWFTEANIQEGLMGSDH
CPVFATLADVVTTGNEKVSLLHLVNPVGMFDRDGRRLREWHPKDVLPLSAKLIPEFDRRQ
SIRDMFTKKAGVRPSSYSSSLGAGEPTPEGEPAGDSARSEQLESKTKTSHAADHGLGLSD
ARHSARSNPLLAQGQTTLQGFFQPSSAKRVTKGRDGDATTTASANTSAPFSCEQTTAAAA
ALPSDRLVFDPILAKESWSKLLGKRKLPRCEHNEPCISLVTKRPGVNCGMSFYICARPLG
PSGEKERGSEWRCGTFIWSSDWNGSPS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
agaaacccatttgggtaccagccatggagagaaaagcgtacatttcaggctatgttcgat
cttttggaagccgatattgtcgtactgcaagagaccaagatacagcgtaaggacctgacg
gacgatatggttttggttcctggatgggacgtctactttagtctgccgagacacaaaaaa
ggatactctggcgttgccatctacacgcggaatgccacttgtgcacccattagggccgaa
gaaggaatactgggtgtgctctgccctcccaaatcaactacccagtttcgaaacctaccc
gatgaccagcggatcgggggttaccccaggccggagcaactctcaggaaacatcgacgaa
ctgctgctggattccgagggtagatgcgttattctcgaattccccgcctttgtgctgctg
ggcgtttacagtccagctaaccgcgatgagtcaagggtggagtttcgcatggagttcctc
caggccctggacgctagagtgcgaaacttggtcgctgaaggcaaggaggtgatattggcg
ggggacctgaacgtcagtcgcgctgaggccgactccaccaacattgtcgagaaccttcga
aaagaaggtctgagcatggaggagtggatgaacctgccctcgcgccgactcttcaaccat
ctggtctttggaggcacggtgcaaggagaacgcgacgtagggcgggagcagcctgtgctg
tgggatctgtgcagagaatttcaccccgcacgagagggcatgaacacatgttgggatacg
aagcgaaacacacgaccggccaacaacggcagccgcatcgactatgtgctctgcagccac
gggttgagagactggttcacagaggccaacattcaagaaggcttgatgggatctgatcac
tgtccagtctttgccacgctagccgacgtcgtgacgactggaaatgaaaaggtgtcgctt
ttgcaccttgtcaacccagtcggcatgtttgacagagacgggcgacgcctccgggaatgg
cacccgaaggacgttctgcccttgtcagccaagctgattcctgaattcgaccggcgacag
agcatccgggacatgtttacgaagaaggctggcgttagaccgtcgagctattcttcgtca
ctgggcgccggcgaacctaccccggaaggagagccagcgggcgactcggcgcgctcagag
cagctcgagagcaagacgaagacgagccacgctgctgatcatgggctcggattgagcgac
gctaggcactccgcaagatcaaatccgctactagctcaaggacagacgactctgcagggc
ttttttcagccctcatccgctaagcgggtgacgaagggaagagacggcgacgccaccacg
actgccagcgccaacaccagcgccccgttttcttgcgagcaaacaacagcggcggcagca
gcgctgccctctgatcgcctggtatttgacccaattctagcaaaagaatcctggtcaaaa
ctgctcggaaaacggaagcttccccgatgcgagcacaatgaaccctgcatcagcctcgtc
acgaagaggcctggagtcaattgtggtatgtcgttctatatctgcgcccggccgctaggt
ccctccggcgagaaagaacgaggctctgagtggcggtgcggtactttcatttggagcagc
gattggaacggatcaccttcttga
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