Trichoderma reesei QM6a: TRIREDRAFT_6015 Help Entry TRIREDRAFT_6015   CDS       T02991                                  Name (RefSeq) hypothetical protein   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism tre  Trichoderma reesei QM6a Pathway tre03020   RNA polymerase Brite KEGG Orthology (KO) [BR:tre00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TRIREDRAFT_6015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tre03021]     TRIREDRAFT_6015 Enzymes [BR:tre01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TRIREDRAFT_6015 Transcription machinery [BR:tre03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      TRIREDRAFT_6015 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Microp_apicomplexa_22 Motif Other DBs NCBI-GeneID:  18486583 NCBI-ProteinID:  XP_006969764 JGI:  Trire2_6015 UniProt:  G0RX09 LinkDB All DBs Position Unknown AA seq 1666 aa AA seqDB search MNIAQPVASEVESVEFTFLSAKEIQAISVKRIENESTFDNLLNPVPGGLYDPALGSWGDA PCATCNLNQNNCPGHPGHIQLPVPVYHPVFLDQAYRLLRATCVYCKGFRLPPKDLHKYTC QLRLLHHGLIHEAHMVATIGENDLAVEIREAIGEGDSEAEEDNSGSDGVTRQREKYVRQC LQGIKMKRGEAKKGKHEGATEMRREIIKEFLADIIKKRECSSCGGISPTYRKDRFVKIFE KALSSKEKAKMAQKALKFGDAMTRDVEMGDADHYDDDDDDDDIPEEGAQRYISSMEVRAR LEELFRKEQDLLSLVYNAKPPTQSSQKVTPDMFFITVVLVPPNRFRPEARTGDSQISEAQ QNALYKNILGCCSRIARVYKGLEEKTSDMASMHQAWTELQDAVNSLIDKNKNPVQGAAAA RTEDGIKQLLEKKEGLFRKNMMGKRVNYAARSVISPDPNIETNEIGVPPVFAKKLTYPEP VTSHNFKDMQQAVINGVDKWPGAFAIENENGQIVNLRNKSVDDRISLANQLLAPTNSNSA RTRNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDG DEMNMHFPQNEVARVEALQIADTDHQYLSGTAGKPLRGLIQDHISVSVALCSRDTFFNRS DFQQLIYSALRPESGHILGERIQLPPPAIIKPAPRWTGKQVISTILANMRPPNCGGLTMS ENAQLKAEQWGAGSEEGVVLIQDGEFITGILDKSQIGPSSSGMIHAVHEIYGPAIAGKLL SALGRLLTRYLGMRAFSCGMDDLRLTAEGEAARRRELLAADKLGLKIASSYVSLENQEDA QNPLLLERLEEVMRDDSKQEGLDLLMNQGSKDITDAVQKALIPNGLEKNFPKNQMQVMTT SGAKGSRVNASLISCNLGQQVLEGRRVPVMVSGKTLPSFRPFDTNIRAGGYIVNRFLTGI RPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCIIKGMEGLTVNYDTSVRDADGSLIQFLY GEDGLDVTKQNYLKDFRFILQNVTSEAAQLKYDPKVGERLGANRQAFQKYMKSAVRHAKA GDRKGKDPLTASFDPATNAFATSETFYEAMTDYIRENPDGLVREKNSQDKAPLQQKVTLN KKNAEMLFAMKYLRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRL REILMTASRTISTPAMTLYPNPELSQHDTEIFAKSISVLRLSQVLDGIVVEELVGKGKLR GLAKIYKIKLKFFPGSEYSSTYAVTVSDIMTTVEKKLLRNILSILKREVKKRQSQSTTAT PEVGVKAGVVETARPEGAAEGGRDDDDDADEDDDDDATGAKNRANRSEAVSYGPNDEDDD AIQKDLSKGAEYDVSDDDDDDEEAAAAAASSSSSRRKKEDDDEDEGDDEGDETKAPQSWS AKLRTERVLNAYAEVTDFQCDDRGGEWCNVTLEFDVNIPKVLMLNIVEDAVRQTVVQQVA GVESCLVSQEKGQTVINTTGVNLRAMQRYSDFIDPHRIQTNDIAAVLDVYGVEACRGNIV QELSGVFGGHGIKVDNRHLNLIADHMTRNGDFTAFSRMGLRGNVSPFTKMSFETTLGFLK DALMDGDWDDLTTPSSRLVMGKLGRVGTGGFDVLTQLPTYYVNALA NT seq 5001 nt NT seq  +upstreamnt  +downstreamnt atgaatatcgcgcagccggttgcctccgaggtggagagcgtcgagttcaccttcctctcc gccaaggagatccaggccatctccgtcaagcgcatcgagaacgagagcacctttgacaac ctgctcaacccggtgcccggcggcctgtacgatccggctctgggatcatggggcgacgca ccatgcgctacctgcaacctgaaccagaacaactgcccgggacatccaggccacatccag ctgccggtccccgtatatcacccggtcttccttgaccaggcctaccgattactgcgagcg acgtgcgtctactgcaagggcttccgtctgcctcccaaggacctacacaaatacacctgt cagctgcgcctcctgcaccatggcctgatacacgaagcacacatggtggccaccattggc gagaacgacctggccgtggagatacgagaggctattggtgagggagacagcgaggccgag gaggacaactctggctcggatggcgtgactcgacagcgagaaaagtacgtccgccaatgc ctccagggcatcaagatgaagaggggcgaggccaagaagggcaagcatgagggcgccacc gagatgcgccgcgaaattatcaaggagttcctcgccgatatcatcaagaagcgcgagtgc tccagctgtggaggcatttccccgacctaccgaaaggatcggtttgtcaagatctttgaa aaggctctctcgtcaaaagaaaaggcaaagatggcgcagaaggcgctcaagtttggcgac gccatgacacgagatgtcgagatgggagacgcagaccactacgacgacgacgacgatgac gatgatattccagaagagggcgcccagagatacattagctccatggaagtgcgggcgaga ctggaggaattgttcaggaaagagcaggatcttctctcactcgtatacaatgccaagcct ccgacgcagagctcacagaaggtcactcccgacatgttcttcatcacagtcgtcctggtg ccgccgaaccgattccgaccagaggcccgcacgggagactcgcaaatctccgaagcccag caaaacgccctctacaagaacatcttgggttgctgctcaagaattgcccgtgtctacaag ggcctggaggaaaagacgtcggacatggcgagcatgcatcaggcctggacggagcttcag gacgcagtcaactcgctcatcgacaagaacaagaaccctgttcaaggcgccgccgccgcg cgaaccgaagacggaatcaagcagttgctcgagaagaaggagggtcttttccgcaagaat atgatgggaaagcgtgtcaactacgctgcgcgaagtgtcatctcccccgaccccaacatc gagaccaacgagattggtgtccccccggtgtttgccaagaagttgacctatcccgagccc gttactagtcataacttcaaggatatgcagcaggcggtgatcaacggcgtcgacaagtgg cccggcgcctttgccattgagaacgaaaatggccagattgtcaacctgcgcaacaagtct gtcgacgaccgcatctctctcgcgaaccagctgctggcgcccaccaacagcaactcggcg cgcacgaggaacaagaaggtccaccggcacctcaccaacggcgacgtcgtcctgatgaac cgccagcccacgctgcacaagccgtccatcatgggccaccgggtccgcgtcctgcccggc gagaagacgattcgcatgcactacgccaactgcaacacgtacaatgccgactttgacggc gacgagatgaacatgcacttcccgcagaacgaggtcgcccgcgtcgaggccctgcagatt gccgacaccgaccaccagtacctgtcgggtaccgcgggaaagcccctgagaggtctgatc caggatcacatctccgtgtccgtcgccctctgcagccgcgacaccttcttcaaccgcagc gacttccagcagctcatctacagcgccctccgtcccgagagcggccacattcttggggag cggatccagctgccgccgcccgccatcatcaagccggcgccccggtggacgggcaagcag gtcatcagcacaatcctggccaacatgaggccgcccaactgcggaggcctgaccatgtct gaaaacgcccagctcaaggccgagcaatggggcgccgggtcggaggagggcgtcgtgctg atacaggatggcgagttcataacgggaatcctcgacaagtctcagatcggacccagctca agcggtatgatacacgccgtgcacgaaatctacggacccgccatcgccggcaagctgctc agtgccctgggtcggctgctcacaagatacctcggcatgcgagccttttcctgtggaatg gacgacctgaggctgacggcggagggagaggcggcgcgacggcgagagctcctcgcggcc gacaagctggggctcaagattgcgtcgagctacgtctcgctggaaaaccaagaggacgcc cagaacccgctgctgctggagcgcctcgaggaggtcatgcgcgacgacagcaagcaggag ggtctcgatttgctcatgaaccagggctcaaaggacattacggacgcggtacaaaaggcc ctgatccccaacggcctcgagaagaacttccccaagaaccagatgcaggtcatgaccact tccggtgccaagggatcccgtgtcaacgcgtccctcatctcttgtaacctgggacagcag gttctggagggtaggcgtgtgccggtcatggtgagcggcaagacgctgcccagcttccgg ccattcgataccaacattcgggcgggcggctacattgtcaaccgattcttgacgggtatc cggccacaggagtactacttccatcacatggccggacgagagggtctgattgacacggcc gtgaagacatcgcgttcaggctacctgcagcgctgcatcatcaagggaatggagggtctg acggtcaactacgacacatccgtgagggacgcggacggctcgctgatccagttcctctat ggtgaggacggactggacgtcacgaagcaaaactacctaaaggacttccggttcatcctg caaaacgtcacctcagaggcggcgcagctcaagtacgaccccaaggtcggcgagcgcctg ggcgccaaccgccaggcgttccaaaagtacatgaagagcgccgtgcgccacgccaaggcc ggagaccggaaaggaaaggatcccctgacggccagcttcgatccggccaccaacgccttt gccacttccgagacgttctacgaggccatgacggactacatccgggagaaccccgacggg ctcgtgcgggagaagaacagccaggacaaggcgcctctccagcagaaggtgacgctcaac aagaagaacgcggagatgctcttcgccatgaagtacctgcggtcgctggtcgagcccgga gaggccgtgggcatcgtcgccggccagtccgtgggcgagccgtcgacgcagatgacgctc aacaccttccacttggccggccactcggccaagaacgtgacgctgggtatcccccgtctg agagaaatcctgatgacggccagcaggacgatttccacgcccgcaatgacgctgtatccc aaccccgagctgtcccagcacgacacggaaatctttgccaagtccatcagcgtgctgcgg ttgagccaggtgctggacggcatcgtggtggaggaattggtgggcaagggcaagctgcgc ggcctcgccaagatctacaagatcaagctcaagttcttccccggctccgagtattccagc acgtatgccgtcaccgtctcggacattatgacgacggtggagaagaagctgctgcgcaac atcctgtccatcctgaagcgagaggtcaagaagcggcagagccagtcgacgacggcgact cccgaggttggcgtcaaagcaggcgttgtcgagacggccaggccggagggagcagcggag ggcggccgggacgacgatgacgatgccgacgaggatgacgacgacgacgccaccggtgcc aagaaccgagcgaaccggagcgaggccgtctcctacggacccaatgacgaggatgacgat gcgatccaaaaggacctatccaagggggcagagtacgatgtgtcagacgacgacgacgac gacgaagaggcagcagcagcagcagcatcatcatcatcatcacgaaggaagaaggaagac gatgatgaagatgagggtgatgacgaaggcgacgagaccaaggcccctcagtcatggtcg gccaagctgcggacggagcgcgtgctcaacgcgtacgccgaggtgacggacttccagtgc gacgaccggggcggcgagtggtgcaacgtgacgctcgagttcgacgtcaacatccccaag gtgctgatgctcaacattgtcgaggacgcggtgcggcagacggtggtgcagcaggtggcg ggcgtggagtcgtgcctggtgtcgcaggagaagggccagacggtcatcaacacgacgggc gtcaacctgcgggcgatgcagcgctacagcgacttcatcgacccgcaccgcatccagacc aacgacatcgccgccgtgctcgacgtctacggcgtcgaggcgtgccgcggcaacatcgtg caggagctgtcgggcgtctttggcggccacggcatcaaggtcgacaaccgccacctcaac ctcattgccgaccacatgacgcgcaacggcgacttcacggcctttagccgcatgggcctg cgcggcaacgtcagcccctttaccaagatgagcttcgagacgacgctcggcttcctcaag gacgccctcatggacggcgactgggacgacctgacgacgcccagcagccgcctcgtcatg ggcaagctgggccgggtcggcaccggcggcttcgacgtcttgacgcagcttccgacgtac tatgtgaatgcgctggcataa

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