KEGG   Trichoderma reesei QM6a: TRIREDRAFT_61039
Entry
TRIREDRAFT_61039  CDS       T02991                                 
Name
(RefSeq) Rad27p/FEN-1 endonuclease-like protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03030  DNA replication
tre03410  Base excision repair
tre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRIREDRAFT_61039
   03410 Base excision repair
    TRIREDRAFT_61039
   03450 Non-homologous end-joining
    TRIREDRAFT_61039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tre03032]
    TRIREDRAFT_61039
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_61039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tre04147]
    TRIREDRAFT_61039
DNA replication proteins [BR:tre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TRIREDRAFT_61039
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TRIREDRAFT_61039
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TRIREDRAFT_61039
Exosome [BR:tre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TRIREDRAFT_61039
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 DprA_N HHH_2
Other DBs
NCBI-GeneID: 18486714
NCBI-ProteinID: XP_006965134
JGI: Trire2_61039
UniProt: G0RIW0
LinkDB
Position
Unknown
AA seq 395 aa
MGIKQLFQIVKEEAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGET
TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA
EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM
DTLCFNTPILLRHLTFSEQRKEPIQEIRLDKVLEGLNMEREQFVDLCILLGCDYLDPIPK
VGPTTALKLIREHGTLEKVVEAIEKDPKKKYTLPEDWPYKDARELFFHPDVRPADDPLCD
FKWDKPDIDGLVQFLVTEKGFSEDRVRSGGARLEKNLKNSQQARLEGFFKPVPKTEAEKV
AHKRKLEEKNEEKKKKLKQEKKEKAAAKAKPRGGA
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggtatcaagcagctgtttcagattgtcaaggaggaggcgccggacgccatcaaggag
ggcgagatcaagaaccagtttgggcgcaaggttgccattgacgcctccatgagcatctac
agcttcctgatcgccgtgcgctccgacggccagcagctcatgaacgacagcggcgagacg
acgtcgcacctgatgggcatgttctaccgcacgctgcgcatggtggacaacggcatcaag
ccgctctacgtctttgacggcgcgccgcccaagctcaagtcgggcgagctggcgaagcgc
ttccagcgcaagcaggaggccaccgaggggctggaggaggcaaaggagacgggcacggcc
gaggacgtcgagaagttctcccggcggacggtccgggtcacgcgggagcacaacgccgag
tgccagcgcctgctcaagctcatgggcatcccgtacatcatcgcgccgaccgaggccgag
gcgcagtgcgcggtgctggcgagggccggcaaggtgtacgctgctgcgagcgaggacatg
gacacgctgtgcttcaacacgcccattctgctgcgccatcttacgtttagcgagcagcgc
aaggagccgatccaggagattcgactggacaaggtcctggaggggctgaatatggagcgt
gaacagtttgtcgacctctgcattctgctcggctgcgactatctcgaccctatccccaag
gtcgggcctacgactgcgctgaagctgatccgagaacacggcactctggaaaaggttgtc
gaggcgatcgagaaggaccccaagaagaagtacaccctgccggaggactggccttacaag
gacgcgcgggagctcttcttccacccagacgtgcgtccggcggacgacccgctctgcgac
ttcaaatgggacaagcccgacattgacggactggtgcagtttctcgtcaccgagaagggc
ttctccgaggaccgcgtccgcagcggaggcgcgcgactggagaagaatctgaagaactcg
cagcaggcgcgtctggagggcttcttcaagcccgtgcccaagacggaggcggaaaaggtt
gcgcacaagcgcaagctggaggagaagaacgaggagaagaagaagaagctcaagcaggag
aagaaggagaaggctgcggccaaggcgaagcctcgcggcggtgcatga

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