Trichoderma reesei QM6a: TRIREDRAFT_61042
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Entry
TRIREDRAFT_61042 CDS
T02991
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRIREDRAFT_61042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_61042
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRIREDRAFT_61042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
Clusterin
AAA_27
Motif
Other DBs
NCBI-GeneID:
18486715
NCBI-ProteinID:
XP_006965085
JGI:
Trire2_61042
UniProt:
G0RI57
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
QVDDEGGFIRFFKSLPDIGDDAVRIFDRGDWYTAHGSDAMFIAKTVYKTTSVVRQLGKND
HTGLPSVTISTTVFRQFLREALFKLGKRVEIWQSPSGRMNWKCVKQASPGNLQDVEDELG
GQIDSAPMIMAIKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNLESLIIQLGVR
ECLIQYEKGDREKEKDPELAKIRQIINNCGVALAERPAGDFGIKDIEQDLARLLKDEKSV
AMLPQTDLKLAMGSAACLIKYIGALQDASNFGQYQLYQHDLAHYMKLDAAALKALNLMPG
PRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKDEIEKRQQLVEAFFTDTELRQTM
QEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGVMDEAYKDPLDDA
YTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRIIRKKLDQLDRDIRQE
FNNAARDLDQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKNGVYFTTK
QLQAYRREHDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVSLSHAAVH
APEAYVRPKIHPRGEGQTKLTAARHPCMELQDDVQFITNDVELTRDKSSFLIITGPNMGG
KSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETAN
ILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQY
PQVKNMHVTAHISGTNSGGDDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRM
AKRKADELEDFTTKHEDLGVSYSTEDVEQGSAMLKKVLVEWKDAVRNGGLVSKEEQVAKL
KELVAADEKLLANPFFQSVKAL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
caggtcgacgacgagggcggcttcatccgcttcttcaagtctctcccagacatcggcgac
gatgccgtgcggatattcgacagaggcgactggtacaccgcccacggaagcgatgccatg
ttcattgccaaaacagtctacaaaacgacgtccgttgtccgacaactcggcaagaatgac
cacacgggtctcccctccgtcacgatatccaccaccgtctttcggcagttcctccgcgag
gccctcttcaagctgggcaagagagtcgagatctggcagagtccgagcggtcgcatgaat
tggaagtgcgtcaagcaggcatccccgggaaacctgcaagatgtggaagacgagcttggt
ggccagatcgactcggcacccatgatcatggctatcaagatatccgcaaaggcttccgag
gcacgggccgtcggtgtctgctttgctgacgccagcgttcgagagcttggtgtcagtgag
ttcctcgacaatgacctctactcgaacctggagtctctcatcatccagctgggtgtccga
gagtgccttattcagtacgagaagggcgacagagagaaggaaaaggaccctgaattggca
aagattagacaaatcatcaacaactgtggtgtcgctctggccgagcgccctgctggtgac
tttggcatcaaggatatcgaacaagacctggctcgcctgttgaaggacgaaaagtcagtt
gccatgctgccccagacggaccttaagctggccatgggctcggcagcatgcctgatcaag
tacatcggcgccctacaggatgcctccaactttggccaatatcagctctatcagcacgac
ttggctcactacatgaagctcgacgctgccgctctcaaagccctcaatctcatgccgggc
ccgcgagacggctccaagacgatgagcatctacggcgtgctcaaccactgcaagaccccc
gtgggcagccgtcttttggcgcagtggctgaagcagccgttgatgagcaaggatgagatt
gaaaagaggcaacagctcgttgaggctttcttcaccgacaccgagcttcggcagaccatg
caggaagagcacctaagatctgtccccgacctgtaccgcctgtcgaagaagttccaacgc
ggtaaagccaacctggaggatgtcgtccgcgcctatcaggttgtcatccgcctgccgggc
ttcatcggcaccttggagggagtcatggacgaggcgtataaagatcccctggacgatgct
tacaccaacaagctccgcgagctgtccgatagtctcggcaaactccaggagatggtggag
cagaccgtggacctcgatgccctggaccggcacgagtacatcatcaagccagagtacgat
cagagcttgcgaatcatccgtaagaagcttgatcagctcgatcgcgatatcaggcaagag
ttcaacaacgccgcacgcgacctcgaccaagaggccgacaagaagatctttctcgaagca
aatcacaaggttcatggtgtgtgcatgcgtctgacacggcaagaggctggctgcatccgt
ggcaagtcaaagtatctggaatgctcaacccagaagaacggcgtctactttaccacaaag
cagctgcaggcctaccgccgtgagcacgaccagctctcgcagaactacaaccgcacccag
agcagcctggtgaacgaggtcgtccaggtagcgtcctcgtattgcccagtcctggagcgc
cttgccggcgtgctggctcacctagacgtcatcgtctcgctctcccacgccgcggtgcac
gcccctgaagcctacgtccgacccaagattcatccccgcggtgaaggccagaccaagctc
accgcggctcgccacccctgcatggagctccaggacgacgtccagttcatcaccaacgac
gtggagctcacgcgggacaagtcctcgttcctcatcatcaccggacccaacatgggcggc
aaatcgacctacattcgccaagcgggcgtcattgccctcatggcccaggtcggctctttc
gtgccctgctccgaggccgagctcaccatctttgactccatcctcgcccgcgtcggcgct
tcggattcgcagctcaagggcgtctcgaccttcatggcggagatgctcgaaacggccaac
atcctcaagtccgccacggccgagtcgctcatcatcatcgacgagctcggccgcggcacc
tcgacctacgacggcttcggcctggcctgggccatatccgagcacattgtcaaggaaatt
ggctgcttcgccatgttcgcaacgcacttccacgagctcaccgccctggccgaccagtac
ccgcaggtcaagaacatgcacgtcacggcgcacatcagcggcaccaacagcggcggcgac
gacgtcaacgccaagcgcgaggtgacgctgctgtacaaggtcgagcccggcatctgcgac
cagagcttcggcatccacgtcgccgagctcgtgcgcttcccggacaaggtcgtccgcatg
gccaagcgcaaggcggacgagctcgaggactttacgaccaagcacgaggacctcggcgtg
agctacagcaccgaggacgtcgagcaggggagcgccatgctcaagaaggtgctcgtcgag
tggaaggacgcggtgaggaacggggggcttgtgagcaaggaggagcaggtggccaagctg
aaggagttggtggccgcggatgagaagctgcttgccaatccgttctttcaatctgtcaag
gcgctctga
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