Trichoderma reesei QM6a: TRIREDRAFT_73778
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Entry
TRIREDRAFT_73778 CDS
T02991
Name
(RefSeq) replication factor C, subunit 5-like protein
KO
K10756
replication factor C subunit 3/5
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03030
DNA replication
tre03410
Base excision repair
tre03420
Nucleotide excision repair
tre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIREDRAFT_73778
03410 Base excision repair
TRIREDRAFT_73778
03420 Nucleotide excision repair
TRIREDRAFT_73778
03430 Mismatch repair
TRIREDRAFT_73778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_73778
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_73778
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_73778
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRIREDRAFT_73778
DNA Replication Termination Factors
ELG1-RFC complex
TRIREDRAFT_73778
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TRIREDRAFT_73778
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRIREDRAFT_73778
Check point factors
HRAD17(Rad24)-RFC complex
TRIREDRAFT_73778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
Rep_fac_C
AAA_24
Rad17
ATPase_2
T4SS-DNA_transf
ABC_tran
ImpA_N
SLFN-g3_helicase
DUF7804
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
18488244
NCBI-ProteinID:
XP_006961615
JGI:
Trire2_73778
UniProt:
G0R7F9
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLEALSYHHELSERLQSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGQYDRVVVQDLLKEVAQTQQ
VDQSAKQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHAEICDALAQSAKRENWEVVQGLHQRIAEESGRNLRRALLMLEAVHAQNEKV
TDTTPIPPADWEALIGQIAKEIIEEHTPARILQVRAKLYDLLTHCIPPTTIIKTLTFKLL
NLIDDGLKAEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccctcatcgtcgacaagcatcgcccgcggtccctcgaggctctgtcatatcaccat
gagctctcagaaagactccagtctctggcccaaagcggcgactttccgcacctgctcgtc
tacggcccctcgggagccggcaagaaaacgaggatagtagcgacgctgaaggagctgtac
ggccccggcgtggagaagatcaagatcgacgcccgagtgttccagacgtctagcaaccga
aagctcgagttcaacattgtcgcctccaactaccacctggaaatcacgccgtcggacgtg
gggcaatacgatcgagtcgtcgtgcaggatctgttgaaagaggtggcgcagacacagcag
gtggaccagtcggcgaagcagcggttcaaggtcgtggtcatcaacgaggcggaccatctc
acccgagatgcccaggcagcgcttcgtcgcaccatggaaaagtactctccaaacttgcgt
ctgattctcttggcgaattcgacggccaatatcattgcgccgattcgttcgagaacattg
ctcgttagagtggccgctcccacacatgccgaaatctgcgacgccctcgcgcagtcggcc
aagagggagaattgggaggttgttcaggggctacaccagcggatagctgaggagagcggg
aggaatctgcgtcgtgcgctgttgatgttggaggccgttcacgcacaaaatgagaaagtc
acagataccacgcctatcccgcctgcggactgggaagcactcatcggccagatcgccaag
gagatcattgaggaacacacgcctgcgcggatcctgcaggtgcgcgccaagttgtacgat
ctgctgacgcactgcatcccgccgaccacgatcatcaagacgctcacattcaagctgctg
aacctcattgacgacgggctcaaggcggaagtcataaagtggtctgccttttacgagcac
cggatcaagacgggcaccaaggtcatctttcacctggaggcctttgtggcgaagtttatg
cgcatcttggaaatgtatctgatgagcatggacatgtaa
DBGET
integrated database retrieval system
