Trichoderma reesei QM6a: TRIREDRAFT_75102
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Entry
TRIREDRAFT_75102 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIREDRAFT_75102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_75102
03041 Spliceosome [BR:
tre03041
]
TRIREDRAFT_75102
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRIREDRAFT_75102
Spliceosome [BR:
tre03041
]
Complex B
Other components
Prp19-related factors
TRIREDRAFT_75102
Complex C
TRIREDRAFT_75102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_15
RPN7
ARM_TT21
AbiH
Motif
Other DBs
NCBI-GeneID:
18488428
NCBI-ProteinID:
XP_006962254
JGI:
Trire2_75102
UniProt:
G0RAE3
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MAATEVGKQQAQPDLYLVSNEDSVYEQDILRDPTRVKPWLEYIDFKTRHGSLIERAFVME
RACMTLPRSYKLWKLYLTFRVKHISKLNPATHAAEFRKVNALFEKSLILLHKMPVIWEMY
LKFLMKQPLVTLTRRTFDRALRALPITQHNRIWSLYLPFANAASGETAVKIWRRYMQVHP
EDAEDLIELLILRGAYTEAAKRYIDILNDTRFTSKHGKGHYELWSEMVEMLVEHAPDIDT
SYENGVDVEAIIRSGIIRFSDQRGKLWVGLATYWIRRGSFERARDVFEEGITTVMTVRDF
TLIFDAYAEFEESIIGALMDAATTRAGKGVENEEADLELDIRMMRFENLMDRRPFLLNDV
LLRQNPNNVLEWEKRVALWGDKKAEVVQTYTDAIATINPKRAVGPFHQLWANYAKFYERG
GDLRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDDAVRVMAKAIQAPKRSNV
DYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLDEVKKVYERIFELRIATPQTVVNYANL
LEEHKYYEESFKVFERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEDCPP
KFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTR
PIYERAITALPDNEAKEMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNADFWSKWEQ
FEVQHGNEDTFKEMLRIKRSVQAKFNTDVNFIASQALARSLQKPEGSPGADTTDAMAALE
KQSSTLHGFVASSTGPQGTTQREEVVASNPDAIDIDNLDD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacagaagtgggcaagcagcaagcgcagccggatctatatctcgtttccaac
gaagattccgtgtacgagcaagacatcctccgcgatccgacacgtgtgaagccatggctc
gaatacatcgacttcaagactcgccatgggagcctcatagaacgggcctttgtgatggag
cgcgcttgcatgacgcttccgcggtcttacaagctctggaaactttaccttacgtttcgc
gtgaaacacatctcgaagctgaacccagccacgcatgccgctgaatttagaaaagtcaat
gctctgtttgagaagtcactgatcctgctacacaagatgccggtaatatgggaaatgtac
ctcaagttcctcatgaagcagcccctggtcacactcactcggcgaacgtttgatcgagcc
ctccgagctctaccgatcacccagcacaaccgcatatggtcattatatcttccctttgcc
aacgcagcttccggagaaaccgctgtcaagatttggcgacgctatatgcaagttcatccg
gaagacgccgaggacctcatcgagcttctgattctcaggggcgcctacactgaggcagcg
aagcgatacatagatattctcaacgatacacggttcaccagcaaacacggcaaaggccac
tatgagctctggagcgagatggttgagatgctggtggaacatgcgcctgacatcgatacg
agctatgagaacggggtcgatgtagaggccatcatcagatccggcatcattcgattcagt
gaccagagggggaagctctgggtcggccttgccacatactggatcaggaggggaagcttt
gagcgcgcgcgggacgtcttcgaggagggcatcacgacagtcatgacggtccgagacttc
actctcatcttcgacgcctatgccgaattcgaggagtccattatcggggccctgatggat
gctgccacgactcgtgctggaaaaggcgtcgagaacgaggaggctgacttggagctcgac
atacggatgatgcgcttcgagaatctcatggacaggcgtccatttcttctcaacgatgtc
ctgctgcgacagaaccctaacaatgtgctagagtgggagaagcgcgttgctctttggggc
gataagaaggctgaggttgtccagacgtacaccgatgcgattgcgacgatcaacccgaag
agggctgtcggtccatttcaccagctgtgggccaattacgccaagttctacgaacgtggc
ggtgatctcagaaacgctcgcatcatcatggaaaaagccgtcaaagttccgttcaaatcg
gtggcagaactcgccgacatgtggattgaatgggctgaaatggaacttcggaacgagaac
ttcgacgatgcggtccgagtcatggcaaaggccatccaagcgcccaagaggtccaacgtt
gattactttgacgaaaccctctctcctcaacagcgagtgcacaagagctggaagctgtgg
agtttctacgtggacctggtggaaagcgtgtcaacactggatgaggtgaaaaaggtgtat
gagcgcatctttgagctcagaatcgcgactccccaaacagttgtgaattacgccaacctc
ctggaagagcacaaatactacgaagaatccttcaaggtctttgagcgcggcctggacctc
ttcagctaccccgtagctttcgagctgtggaacctctaccttaccaaggctgtcgaccgg
aagattggcatcgaacgattgcgggacctcttcgagcaggcagtggaggactgtccgccc
aagttcgccaagacgatctatctcatgtacggcaacctggaggaggagcgtggccttgcc
cgacatgcaatgaggatctacgagagagcaacgcgtgccgttgccgatgaagaccgggcc
gacatgttcaatttctacatcaccaagtcagcttccaactttggactgccgtcgacacgc
cccatctacgaacgagcaatcactgctctcccggacaacgaagcgaaggaaatgtgcctc
aagttcgccgatatggagaagcggctgggtgagattgaccgggcgagagccatctatggg
catgcctcacagttctgcgatcctcggacaaatgcggatttctggagcaagtgggagcag
ttcgaagtccagcatggcaacgaagacacgttcaaggaaatgctgcgaatcaagcgaagc
gtccaggccaagttcaacaccgatgtcaactttatcgcgtcacaagctttggcgcggagt
ctccagaagccggagggctcaccaggcgcagacaccacggatgccatggcggccttggag
aagcagtcttcgacgctgcacggcttcgtggcttccagcacgggaccgcagggcacgact
cagagggaggaggtggtggcatccaatccagatgctattgatattgacaatctcgatgac
taa
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integrated database retrieval system
