Trichoderma reesei QM6a: TRIREDRAFT_77084
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Entry
TRIREDRAFT_77084 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_77084
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
TRIREDRAFT_77084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
OB_HELZ2
DUF4355
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
18488706
NCBI-ProteinID:
XP_006964501
JGI:
Trire2_77084
UniProt:
G0RGM9
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MAAQGRGGLRSSTFNTAPEGGNDFQRRGPGHARTGSRNYEGNWRTQGQSQDQPTNVGQTQ
GFQPGHRSRGSVNQSMSAIGGFQYNPGQAPVLPLAGQMMMPQMYNQQLNPMQISQLQALQ
AAQMNSQQFQGLQGSQHAGQLGGPQQQQQRKTLFTPYLPQATLPALLGDGQLVSGILRVN
KKNRSDAYVTTLDGLLDADIFICGSKDRNRALEGDLVAVELLDVDEVWGQKREKEEKKKR
KDITDTRSGSINQGSQAAGQADENNPPEGAIRRRGSLRQRPTQKKNDDVEVEGQSLLLVE
EEEINDEQKPLYAGHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAAREGGNSRS
NDSRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYADRIFVACIKRWPITSLH
PFGTLVEQLGRMGDLKVETDALLRDNNFGSDEFSDAVLRSVGLQDWSLAQEDEAAIASRR
DYRDEKVFTIDFNGSAELGNAVHVTSRPDGKIDIGIHVPDVTHFVKPNSLVDREAKKRGT
AVHLINRFCPLLPPKLSGEVCSLVPGEERLTVSVVFTVNPVNGAVAEGDSWVGKSIIKSG
GKVSLADIDKALTDASTYDNTTVPVNTIQILQAVAQKFREARLGAGSEPIAPLRLLQQLD
DENQLVQHNIFDSTEALELVEELMHKANSYVAQRLAEGLPDKALLRRQAAPNPRRLQTFV
ERMTALGYDIDASGSGALQNSLFKVEDADLRKGMETVLLKSMQRAKYFIAGKTPKVVWPH
YTLNLPLYTHFTNPTRRYADIIVHRQLEAVLSEGKIEFSDDMENLVKTVELCNTKKDSAQ
NAQEQSIHIESCRTMDKKRQEVNGDLIAEGIVLCVYESAFDVLIPEWGFEKRVHCDQLPL
KKAEFRKEKRVLELYWEKGVPSSAYVPEDERPKAAASMRMSNALAAARQAEEAERVKKER
EEAARKQTVTGTISTDDVDALFDDDEDDTSDVTEAMAGASLAERPTQSVPGSPARSTSNA
GTLHRTRSDSKVPIAEAVETRLTNKEKYLKLFTLREEGGDYIQDVTEMTRVPIILKTDLT
KSPPCLTIRSLNPYAL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagggacgcggcggcctgcgcagcagcaccttcaacactgctcctgagggt
ggcaatgatttccagcgccgcggtcccggccacgctcgcactggatctaggaactatgag
ggcaactggcgcacccaaggtcaatctcaggaccagcccaccaacgttggtcagacccag
gggttccagcccggccaccgttcccgcggctccgtcaaccagtccatgtctgccattgga
ggcttccagtacaaccccggccaggctcccgtccttccccttgctggccagatgatgatg
cctcagatgtacaaccagcagcttaaccccatgcaaatcagccagcttcaggcactgcaa
gctgcccagatgaactcacaacaattccagggcctccagggctcccaacacgctggccag
ctgggcggcccgcaacagcagcagcagcgaaagacgctcttcaccccctatcttccgcag
gctacccttcccgccttgctcggagatggccaacttgtgtcgggcatcctccgagtcaac
aagaagaaccgcagtgatgcttatgtcacgacgctcgatggtctcttagatgccgacatc
ttcatttgcggcagcaaagatcgcaaccgcgccctcgagggtgatctggtcgccgtcgag
ctcctggatgtcgatgaggtctggggtcagaagcgggagaaggaagagaagaagaagcga
aaggacattaccgacactcgctcaggctccatcaaccagggcagccaggccgctggacaa
gccgacgagaacaatcctccggagggagccattcgccgccgtggcagtctccgccagcga
cccacccagaagaagaatgacgacgtcgaagtcgagggccagagcctcctccttgttgag
gaagaggagatcaacgatgagcaaaagccactgtatgccggccacgtcgttgctgttatt
gagcgtgtggctggccagatgttttcaggtactctgggcctgcttcgacccagtagccag
gctaccaaggagaagcaggaagcagagagggcggcccgagaagggggcaactctcgctcg
aatgacagtcgccagcaggacaagcccaagattgtttggttcaagccgaccgacaagcgc
gttcccctgattgccattcccacggagcaggcgccccgagactttgttgagaagcaccag
gactacgccgatcgcatcttcgtcgcgtgcatcaagaggtggcccatcacgtcccttcac
ccctttggtacacttgtcgagcagttgggtcgtatgggtgaccttaaggtggagaccgat
gcgctgcttcgcgacaacaacttcggttccgatgagttctccgacgcggtgttgcgcagt
gtcggcctccaggactggtcgctcgctcaagaggacgaggcggccattgcctcgcgccgc
gattaccgcgatgaaaaggtctttaccattgacttcaacggtagtgccgagctcggcaat
gcggtgcacgtcacgtcccgccccgatggcaagattgatatcggtatccacgtgcctgat
gtcacgcattttgtcaagcccaactctctcgtggaccgagaggccaagaagcgcggtacc
gccgtccatctcatcaaccgattctgccccttgctgcctcccaagctgtctggagaggtt
tgctctctcgtgccaggcgaggaacgtctcaccgtcagcgttgtcttcaccgtgaacccg
gtcaacggcgccgttgccgaaggcgatagctgggtgggcaagagcatcatcaagtctggc
ggcaaagtgtcgctggccgatattgacaaggccctgaccgacgcttccacttatgacaac
acgacggttccggtcaacaccattcagattctgcaggctgtggcccagaaattccgtgaa
gcgcgcctgggtgccggcagcgagcccattgcccccctccgcttgttgcagcagctggat
gacgagaatcaactggtgcagcacaacatctttgactctacggaagctctggagcttgtc
gaagagctcatgcacaaggcaaacagctatgtggcccaacgtctggcagaaggcctgccc
gacaaggctctgctgcgccgccaggccgctcccaacccacgacgcctgcagacgtttgtc
gagcgcatgacagctcttggatacgacatcgatgcctctggaagcggggcactccagaac
agccttttcaaggtcgaagatgcagatcttcgcaagggcatggagactgttcttctcaag
tcgatgcagcgagccaagtatttcattgctggcaagacccccaaggtcgtctggcctcac
tacacgcttaacctgccactgtacacacactttacgaaccctactcgccgatacgctgat
atcattgtccatcgacaactggaagctgtcctgtccgagggcaagattgaattttcagac
gacatggagaacctcgttaagactgtcgagctctgcaacaccaagaaggactcggcgcag
aacgcgcaagagcagagcatccacattgaatcctgccgcaccatggacaagaagcgacag
gaagtcaatggcgacctcatcgctgagggcatcgtcctctgcgtgtatgagtcggctttc
gacgtgctgattcccgagtggggcttcgagaagagggtccactgtgatcagctaccgctg
aagaaggctgagtttcgaaaggagaagcgtgtcctggagctctactgggagaagggcgtt
cccagctccgcgtatgtgcctgaagatgagagacccaaggctgcggcctccatgagaatg
tccaacgcgctcgccgctgctcgacaggcggaagaggctgagcgagtgaagaaggagcga
gaggaggctgctcgtaagcagaccgttaccggcacgatctccacggacgatgtcgacgcc
ctgtttgatgacgacgaggacgatacttcggatgtgactgaagccatggcgggagcatcg
ctggctgagcgacctacacagagtgttccgggatccccggcacgctcaacttccaacgct
ggaactctgcaccgcactcgatccgattccaaggtgcccatcgcagaggccgtggagacc
cgattgacgaacaaggagaagtacctcaagctgttcactctacgcgaggagggtggggac
tacatccaagacgtgactgagatgacccgggttcccattattctcaagacggaccttacc
aagagcccaccttgccttaccattcggtctctcaacccctatgcgttgtag
DBGET
integrated database retrieval system
