Trichoderma reesei QM6a: TRIREDRAFT_80528
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Entry
TRIREDRAFT_80528 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tre03009
]
TRIREDRAFT_80528
Ribosome biogenesis [BR:
tre03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
TRIREDRAFT_80528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
NBCH_WD40
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_EML
WDR55
Beta-prop_LRRK2
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_WDR19_2nd
PQQ_2
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_KIB1-4
Motif
Other DBs
NCBI-GeneID:
18489182
NCBI-ProteinID:
XP_006967794
JGI:
Trire2_80528
UniProt:
G0RRD8
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MLSEELFSSVCGPPIAANTAISKDVGIYAHTLTPTWAVKSTFKKSSAPVHCLAVSDSHVF
AAQDQKAHVHVYSRARGNQEALVPFQERIRCIALAGDVLVLGTAEGRLILWETCTGRQIT
TPPCHVQAVSCLAVSPHHVLSASDDSNINVWSLPRLLEPGQDIGHEPDRTLSNHRGAITD
LVLGPGSNPETSLCVSASKDKTCILWNYQTGQVLRTLLFPTAPLCISLDPCARALFVSSE
DRSLYLVEFFGDKPLLGSRSAELASIVMQINSPLGVVDEDAGPASCMAVSHDGTSVVTGH
VKGKILKWNLVDNSHPTELANLNASVTNLVFAPLFSEKKNTQAGTVVKPNQSQRQYTLTT
QLQGDLDHDTRFSQMLNTNGFSDETIAQALASFAASSS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgaggagctcttctcttcggtgtgcggcccgccgatagctgccaacacggcc
atatcaaaggacgttggtatctacgcgcatactctgacgcccacgtgggctgtcaagtca
accttcaagaagagctcagcaccggtccattgcttggctgtcagtgacagccacgtcttc
gctgcccaggatcagaaggcccatgtccatgtctattctcgagctcgaggaaatcaagag
gctcttgtgccctttcaggagaggatccgatgtattgcccttgctggcgatgttctcgtc
cttggaacagctgagggccggctcattctttgggagacctgcacgggacggcaaatcaca
acgcctccctgccatgtgcaggctgtaagctgccttgccgtgtctccccaccatgtgctg
tctgcctcagatgactccaacatcaacgtctggtccctgcctcgcctccttgagcctggg
caggatatcgggcatgagccagataggacactttcaaatcaccgcggggccattaccgat
cttgttctcggcccaggctccaatcccgagacaagcctgtgtgtatcggcaagcaaagac
aagacgtgcatcctgtggaactaccagacgggtcaagtactgcgaacattgctgttccct
acggcccctctctgcatttcgttggatccctgtgcccgagccctctttgtctcttccgaa
gatagaagtctctatctcgtcgagttctttggcgacaagccgctgttggggtcccgtagt
gccgagctggcatccattgtcatgcaaatcaactcccccttgggagtggtagatgaggac
gcgggacccgcctcttgcatggcagtcagtcatgacggcacttccgttgtgactggacac
gtcaagggtaagattctgaaatggaatctagttgacaacagccatcccacagaactggca
aacctcaatgcgtccgtcaccaacctagtctttgcccctctcttctcagaaaagaagaac
acccaggcgggcacggtggtgaagccaaatcagtctcagcgacagtacaccctgacaacc
cagttgcagggtgacttggaccatgacacaagatttagccagatgctgaataccaacggc
ttctctgatgaaaccattgcacaagctctggcgtcgtttgctgcgtcaagttcatga
DBGET
integrated database retrieval system