Talaromyces rugulosus: TRUGW13939_00062
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Entry
TRUGW13939_00062 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14791
periodic tryptophan protein 1
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_00062
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
Other 90S particles
TRUGW13939_00062
Pre-60S particles
Other pre-60S particles
TRUGW13939_00062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD_LRWD1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR41
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
55987579
NCBI-ProteinID:
XP_035339170
UniProt:
A0A7H8QHJ0
LinkDB
All DBs
Position
I:join(213705..213952,214012..215389)
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AA seq
541 aa
AA seq
DB search
MNSMITTTTWVRRGVAAQFPTKYDIDEDEINRISKLARLQLEDAQGDLKAAESAGNDEDE
DDDAMDDDEEEEKAGTGSNKGAADEKDDDDLKEYNLDHYDSDEVDEDGEEATMFGNVKSL
AYHKPGEKDPYLEIPEDEENEDREELQILGTDNLLIAGKVEDEVAHLEVYVYEDSADNLY
VHHDIMLPAIPLSVEWLDFPVGKPEENRTSGNFVAVGTMDPDIEIWDLDIVDCMYPNAIL
GEGSAEQDTKPSKKKKKAKKANDEYHVDSVLALSANRQHRNLLASASADLTVKLWDLTTQ
KCAKSYTHHTDKVCALDWHPRESTVLLSGSYDRTIVAADMRAPEAKAARWGVPADVENLR
WDIHDPNFFYVTTDSGLVCRYDIRNAPASPKDSKPVWTLQAHDDSVSSFDINPTIPGFIV
TGSTDKQVKLWNTVDNKPSMVISRKLEVGKIFSTSFAPDPEVSFRLAVAGSKGVVQIWDT
STNAAVRRAFAGRVPDVAPGDNGEVKEKITGVSQNDDESDSSEGEDDGDEKKDGWESMEE
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaattctatgatcacaactacgacgtgggtgcgacgcggagtcgcagcccagttccct
accaaatacgatatcgacgaagatgaaatcaatcggatatcaaaacttgcgcgcctgcaa
ttggaggatgcacagggcgatttgaaagctgccgagtcggcaggaaacgacgaggacgag
gacgacgatgcaatggacgatgacgaagaggaagaaaaggcagggactggctcgaataaa
ggagcagcagacgaaaaagatgacgatgatctgaaagagtacaatctcgaccactacgac
agcgacgaggtcgacgaagatggcgaggaggccaccatgtttggcaacgtcaagtcgcta
gcctaccacaagccaggcgagaaggatccgtacctcgaaatccccgaagacgaggaaaac
gaggatcgggaggagctacagatcctgggaacagacaacctgctgattgccggaaaggtt
gaggatgaggttgcccacttggaagtgtacgtgtacgaagactcggcagacaacctttat
gtgcaccacgacatcatgctccccgccattccgctgagtgttgagtggcttgatttcccc
gtcggaaaacccgaggaaaatcgtaccagcggaaactttgtcgctgttggaacaatggat
cccgatattgagatttgggatctcgacattgtcgactgcatgtatcccaacgcgatcctc
ggcgaaggcagtgccgagcaagacaccaagccaagcaagaaaaagaagaaggccaagaaa
gccaacgacgagtaccacgtcgattccgtgctggctctgtccgcaaaccgacaacatcgc
aacctgctagcctcggcttcggctgatctaacggtcaagctatgggacctaaccacgcag
aaatgcgccaagtcgtatacacaccacaccgacaaggtctgcgctctcgactggcatccc
agagagtcaaccgttctgctcagcggaagctatgaccgcactattgttgctgcagatatg
cgagctcccgaagccaaggcagctcgctggggcgttccagccgacgtcgaaaacttgcgg
tgggatatccacgaccccaatttcttctacgtgaccacagactcgggccttgtttgccgg
tacgatatccgcaatgcgccggcttcgccaaaggactccaagcctgtgtggacactgcag
gcgcacgacgactctgtctcgtcgtttgacatcaaccctaccatcccaggtttcatcgtt
acgggatcgacggacaaacaggtcaagttgtggaacacagtggacaacaaacccagcatg
gtcatctcacgcaaactcgaagtaggcaagatcttttcgacctcgttcgcgccagaccca
gaggtcagcttccgtctagctgtagcgggcagcaaaggcgtagtccagatctgggatacc
tcgacgaatgccgctgtgcgtcgtgcgtttgcgggccgtgttcctgatgttgcgcctggc
gataacggcgaagtcaaggaaaagatcactggggtcagccagaatgatgacgaaagcgac
tcctccgagggcgaagacgatggtgacgagaaaaaggatggctgggagtcgatggaggag
gattag
DBGET
integrated database retrieval system