Talaromyces rugulosus: TRUGW13939_00092
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Entry
TRUGW13939_00092 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRUGW13939_00092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_00092
Enzymes [BR:
trg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TRUGW13939_00092
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TRUGW13939_00092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
55987609
NCBI-ProteinID:
XP_035339200
UniProt:
A0A7H8QHL8
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All DBs
Position
I:complement(join(306876..307237,307292..308088,308144..308235))
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AA seq
416 aa
AA seq
DB search
MSPAFSEWRKLPISLSELCINTTLRCGQSFRWRQLPESDEWRCVLRGRIISLKQDPSHLY
YRSYAPQPTLPTPPASTPSSHAGLKSDSPVKDSNADETLAIVTHYLNLTSNLTELYTQWS
DSDPNFKKKAPNFTGIRILRQDAWEALVSFICSSNNNIARISQMVEKLCINYGDPVGTID
GYSYHDFPRPEALTGEDVEGRLRGLGFGYRAKYIYQTAVMVAKDREKGWLDSLRNPESPA
FGVEPSPGGDMKPEGREGYRDAHEKLLELQGVGPKVADCVSLMGLGWGEAVPVDTHVWQI
AQRDYKFGKGGNKSLTKATYDAVGNHFRKLWGQEAGWAHSVLFTADLRSFSERLTSKVEV
KIKQEDDAAPVESQRASASIVTTKRPPDDDSDTKEELVVEAAETTGTRRRSKRRRT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgctttctcagaatggcgcaaactgcccatcagcctgagtgagctctgcatc
aacaccactcttagatgtggccagtcttttagatggcgccagttgcccgaaagcgacgaa
tggcgatgtgttctccgcggacgcatcatctccctcaagcaagacccgtcgcacttgtat
tatagatcatacgctcctcaacccacacttccaacaccaccggcatcgactccttcttcg
cacgcaggccttaaatcggactctcctgtgaaagattcaaacgcagacgagaccttggcc
atcgtcacccattacctcaaccttacatccaatctgaccgagctatatacacaatggtct
gattcagacccgaatttcaagaagaaggcgccaaattttacggggatccgcattcttcgc
caggatgcctgggaggcactggtgtcgtttatatgcagtagcaacaacaatattgcccgg
atctcgcaaatggtggaaaagttatgcataaactacggcgacccagtgggaacaatcgac
ggctattcgtatcacgacttccctcgcccagaggcattgactggggaggatgttgagggt
cggctgaggggccttggcttcggatacagagccaaatatatttaccaaacggcggttatg
gtggccaaagaccgagaaaagggttggcttgactcgctgcggaatccggaaagcccggcg
ttcggtgttgagccttcccccggcggtgacatgaaaccagagggtcgagagggttatcgc
gatgcccacgaaaagctcttggaattacagggcgttgggccaaaggttgcagactgtgtt
tctttgatgggtcttggatggggagaagcagtgccggtcgacacacatgtttggcaaatc
gcacaacgagactacaaatttggcaagggcggcaacaagtcgttaacgaaagctacgtat
gacgcggttggaaaccatttccgcaagttatggggtcaagaggcaggatgggcgcacagc
gtcttgttcactgcagatctccgaagtttctcggaaaggctgacatcgaaggtcgaagtc
aagatcaagcaggaagatgacgctgcgccagtggagagtcagagagcctcagcctctata
gttactacgaaacgtccacccgacgatgatagcgatacgaaggaggagctggttgtcgag
gctgccgaaacgacgggtactcgccggaggtcgaaacggcggcggacgtga
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