Talaromyces rugulosus: TRUGW13939_00333
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Entry
TRUGW13939_00333 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
trg
Talaromyces rugulosus
Pathway
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRUGW13939_00333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_00333
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_00333
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRUGW13939_00333
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRUGW13939_00333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_4
zf-CCCH_9
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
55987848
NCBI-ProteinID:
XP_035339436
UniProt:
A0A7H8QH30
LinkDB
All DBs
Position
I:1017425..1018189
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AA seq
254 aa
AA seq
DB search
MAAEVQSVADRLITGDRTHPPDYDFSFTPFLRRNFGFGLATDIPVCKAFKEGHCPLGPTC
PDRHPTPSRVTTSTTNASGLAPSVTHGSLVCKHFLKGLCKKGFKCEYLHEYNLRRMPECQ
SFSRSGYCPNGEDCLYHHVRETARLPRCEHYDRGFCPLGPICAKRHVRQRLCPYYVVGFC
PDGRACEHGAHPRWSDNLPRPQIRVEKTEEDLERERLLIREEQEKEEERQREWRNERGRG
GFMRYRGRGRGRGM
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaagtccagtcggtcgccgaccgattgatcaccggcgatcgcacgcatccg
ccagactacgatttctcgtttactcctttcctgcgaagaaactttggattcgggcttgcc
accgacatccccgtctgcaaggcgttcaaagaaggccactgtcccctgggcccaacatgc
cccgacagacacccgacaccctcgcgcgtgacgacctcaacgaccaacgcgtccggcctc
gcgccctcggtgacacacggctcgttggtctgtaagcatttcctcaagggcctgtgcaaa
aagggcttcaaatgcgagtacctccacgaatacaacctgcggcgcatgcccgagtgccag
tccttttctcgctcgggatactgccccaacggcgaagactgtctctaccaccatgtccgc
gagacggcccgactgccgcgatgcgaacactacgatcgcggcttctgcccgctggggccc
atctgcgccaagcgccatgttcgacagcgactgtgcccgtactatgtagtcgggttttgt
ccagacggcagggcgtgtgagcacggcgcgcacccgcgctggtcggataatctgcctcgg
ccgcagattcgcgttgagaagacggaagaggatctcgagcgggaacggcttctgattcgc
gaggagcaagaaaaggaggaagaacggcagcgagagtggcggaatgagcgaggtcgagga
ggcttcatgcggtatagaggcaggggtcgcggccgaggaatgtga
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integrated database retrieval system
