Talaromyces rugulosus: TRUGW13939_00352
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Entry
TRUGW13939_00352 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
trg
Talaromyces rugulosus
Pathway
trg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRUGW13939_00352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_00352
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_00352
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TRUGW13939_00352
Coactivators
SAGA/TFTC/STAGA complex
TRUGW13939_00352
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
TRUGW13939_00352
STAGA complex
TRUGW13939_00352
TFTC complex
TRUGW13939_00352
SAGA complex
TRUGW13939_00352
SLIK complex
TRUGW13939_00352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
TFIID_NTD2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
PEP5_VPS11_N
PROPPIN
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_ACSF4
eIF2A
Motif
Other DBs
NCBI-GeneID:
55987865
NCBI-ProteinID:
XP_035339453
UniProt:
A0A7H8QH47
LinkDB
All DBs
Position
I:complement(join(1060570..1061632,1061688..1062502,1062556..1062599,1062653..1062791,1063528..1063716))
Genome browser
AA seq
749 aa
AA seq
DB search
MSAPGGGAPSPAQRSGSIGPNASMPPMSQQPMNANAPVVHTPTTPGPSGPPPAPVSQQNL
NQIVIDYLAKKGYTRTEAMLRMESASQEIDGRSLPQSNENQRPKYQAGFDLLKVWIEDNL
DLYKPELRRVLWPLFVYSFLDLATALYPQEAQQYFEANKNLFLPEHAEDIRSLQKITLPE
HVQDNSTAKLYRGNKYRLILSNPAFSNLMQFLENKQKEGGSVMSAIMSSYCNVITKDRAA
DDRFSFAAMLGRSSESHTFPAEDEGIPGHHPGSAYTGDNPAMTGTLPRLRLGKFPPEAEL
ESDVRAELEDHDSKNPPAPGQNSLIQEYDDMIKKEEDEEAPTHADVPFPPSTARDVAMEV
QRVKENRDRFRIEGRSGGVGVACSVCMFTFHNTHDRMICLDFSDDNMLVAAGFEDSYIRV
WSLDGQAIRPSHEGIEEFTSPPSNSKRLFGHSGPIYSVKFAPSAPRSEGEIAPTNARWLL
SSSADKTIRLWSLDLWQCMVIYKGHDQPVWDLSWGPFGYYFVSGGHDKTARLWATDRIRQ
QRIFAGHDQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSR
SGKYLASADDQGSIFLWELASGRFVKRMRGHGKGGIWSLDWSVESTVLVSSGADNTVRVW
DIAPPASEPTSNQTRLAADTGSGTKIDANAGGSSTQASTSVGPGSSKKKGKENVVTPDQI
SAFPTKKSPVYKVKFTNMNLIVAGGAYLP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccaggtggtggtgctcccagccctgcccagcgcagtggcagcattgggcca
aatgcttcaatgccaccaatgtctcaacagcccatgaatgcgaatgcgcctgtagtgcat
acgccgacgacgcctggtccttcggggccgcctccggcgccggtttcgcagcagaacctc
aatcaaattgtcatagactacctggccaagaaaggctatacgaggactgaggcaatgctc
cgcatggagtccgccagtcaagaaatcgacggccgatccttaccccagtctaacgaaaat
caacgtccaaagtatcaagctggttttgatcttttgaaggtctggattgaagataatctc
gatttatacaagccggaacttcgacgtgtgctttggccgctgtttgtctattccttcctc
gatctggcgacagccttgtatccccaggaagcgcaacaatattttgaagcgaacaaaaat
cttttccttcccgagcatgcagaggacatacgctcactccaaaaaatcaccctccctgaa
catgtccaggataactcgaccgcgaaattgtaccgaggaaacaaatatcggttgatcctc
agcaatcctgccttctcaaatttgatgcagttcctggagaacaagcaaaaagagggcggc
tctgtcatgtctgctatcatgagcagctactgcaatgtcatcacgaaggaccgagctgca
gacgatcggttcagtttcgctgcgatgctcggtcgctcgagcgaaagccacacgtttcct
gccgaagacgagggtattccaggccaccatccaggctcggcatatactggcgacaatcct
gcgatgactggtacattgccaaggctgagactcggaaaattccctccagaagcagagttg
gaaagcgatgttcgcgcagagctcgaagaccacgactccaaaaaccctcctgcacctggt
caaaattctcttattcaagagtatgatgatatgattaagaaggaggaagatgaggaggct
cccacgcatgcagatgttccgtttcctccatccacagcccgcgacgttgctatggaggtg
caacgagtcaaagaaaatcgcgaccgatttcggatcgagggccgttctggcggcgttggc
gttgcatgctcagtctgcatgttcacatttcacaatacccacgatcgcatgatctgcctt
gatttctccgatgacaacatgctggtagctgccggttttgaagactcgtacattcgcgtc
tggagccttgatggccaggccatcaggccgagtcatgaaggcatcgaagagtttaccagc
ccgccttccaactcaaaacgtctgtttggtcattcgggcccgatttactcggtcaagttt
gctccttcggcacctcgttcagagggtgaaatagctccaaccaacgcacgttggctcctc
tcttcttcggccgataaaactattcgactgtggtcgctggacctgtggcagtgtatggtc
atctataaaggccatgatcagccagtttgggatctcagctggggaccttttggctattac
tttgtgtctgggggccacgacaaaaccgctcgtctctgggccactgaccggatccgccaa
cagcgaatctttgccggccatgatcaagatgtcgattgcgtctgtttccatccaaactcg
gcatacgttttcacgggaagctctgaccgtaccgtccgaatgtgggcagtgactactgga
aatgcagtgcgcatgttcactggtcatactggcaacatcactgctcttgcttgcagtcgc
agtgggaaatatcttgcatctgccgatgaccaaggctctatcttcctgtgggagcttgcc
tcgggtcgtttcgtgaagcgcatgcgtggacacggtaagggtggtatctggtcattggac
tggagtgtcgagtcgaccgtgctggtctcgtctggtgccgataacacggtgcgagtttgg
gacattgctcctccagcctcggagccaacatccaaccagacacgactcgcggcggatact
ggtagcggcacaaagattgatgccaatgcagggggctccagtacgcaggcatcgacttca
gttgggcctggaagcagcaaaaagaagggcaaagagaatgtggtgaccccggaccaaatc
agcgcgtttccgacaaagaagagtccagtttacaaggtcaagttcacgaacatgaacctt
attgttgccggaggcgcttacctcccttag
DBGET
integrated database retrieval system
