KEGG   Talaromyces rugulosus: TRUGW13939_00640
Entry
TRUGW13939_00640  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K12876  RNA-binding protein 8A
Organism
trg  Talaromyces rugulosus
Pathway
trg03013  Nucleocytoplasmic transport
trg03015  mRNA surveillance pathway
trg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRUGW13939_00640
  09122 Translation
   03013 Nucleocytoplasmic transport
    TRUGW13939_00640
   03015 mRNA surveillance pathway
    TRUGW13939_00640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trg03019]
    TRUGW13939_00640
   03041 Spliceosome [BR:trg03041]
    TRUGW13939_00640
Messenger RNA biogenesis [BR:trg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     TRUGW13939_00640
Spliceosome [BR:trg03041]
 Complex C
  Other components
   EJC/TREX
    TRUGW13939_00640
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 PCF11_charged RRM_occluded
Other DBs
NCBI-GeneID: 55988153
NCBI-ProteinID: XP_035339740
UniProt: A0A7H8QJ45
LinkDB
Position
I:join(1905884..1906123,1906227..1906457)
AA seq 156 aa
MATEMEVDPPTQDDGPAQSGSAEPRTHSAAVAVRSIEGWIVLVTNIHEEASEEDVTDLFA
EHGEIKNFNLNLDRRTGYVKGYALIEYSTLPEASAAIEALNDTKLLDQTIHVDFAFVRPP
PGNKGKAGAPKGARGGRTRSRSRDRSRSPGADNGRD
NT seq 471 nt   +upstreamnt  +downstreamnt
atggcgaccgaaatggaagtcgaccctcctacccaggacgacggccccgcgcaatcagga
agcgccgaacccagaacgcattctgcggcggtcgcagtacgaagtatcgaaggatggatt
gtgctagtgacaaatatccacgaagaagcttctgaggaagatgtgacggatctcttcgct
gagcacggcgaaatcaaaaatttcaacttgaatctggatcgtcgcacgggttatgtcaag
ggctatgctctgatcgaatactcaacacttcccgaagcaagcgctgcgatcgaagctctc
aacgacacaaagctacttgaccaaactattcacgtggactttgcctttgtccgacctcct
ccaggcaacaagggcaaggctggagcaccaaagggagctcgtggcgggagaacaagaagc
agaagccgtgatcgcagtcgcagtcctggagccgacaatggaagggactaa

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