Talaromyces rugulosus: TRUGW13939_00712
Help
Entry
TRUGW13939_00712 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_00712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_00712
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRUGW13939_00712
Spliceosome [BR:
trg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRUGW13939_00712
Complex C
U5 SnRNP specific factors
TRUGW13939_00712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DDX23
ResIII
P-loop_SecA
DUF2986
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
55988225
NCBI-ProteinID:
XP_035339812
UniProt:
A0A7H8QK67
LinkDB
All DBs
Position
I:complement(join(2106689..2106848,2106912..2108890,2108968..2109273))
Genome browser
AA seq
814 aa
AA seq
DB search
MDGVSINGQEPPPAPLADAPPPPPPMELDGVAPPPPADIEPPPPPGEAYPPPPPPTPASS
SDGVVKKNKSGWGSSGKAAAAKPLSVEELLRKKREADAAASKPKFLSRAERERLALEKRT
KEVEAERRAKIEQSRPTNGQNTSNTGNGVSKNGDSASRSIPTGPRALRTGDNIPTGPAAM
RNGQSNNNNRDYDMSPPPPPKRIAFGKNDSKGKKPAISEEEAENALIRQRYMGADQTSNF
SAKKKRKRTTERKFNFEWNAEEDTSGDYNPLYQHKAEANFFGRGRLAGFGEDAVDSATKN
YVKAIEIRDQEAGSARAREILEMERRRKEESSRGAIDKHWSEKRLDQMRERDWRIFKEDF
NISTKGGSIPNPMRSWDESNLPSRLRDIISQVGYTDPSPIQRAAIPIALQSRDLIGVAVT
GSGKTAAFLLPLLVYIAELPRLDEFEWRKNDGPYAIILAPTRELAQQIEIEAKKFSKQLN
FNVVSIVGGHSLEEQAYSIRDGAEIIIATPGRLVDCLERRMLVLSQCCYVIMDEADRMID
LGFEEPVNKILDALPVTNEKPDTEEAENAQAMSQHISGRDNRYRQTMMYTATMPSAVERI
ARKYLRRPAIVTIGNVGEAVDTVEQRVEFVSGEDKKKKRLGDILMSGQFKPPIIVFVNIK
RNCDAVAKDIKHLGFTSVTLHGSKTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVS
LVVNFNMANNIESYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMLAKSSISRVPEE
LRKHEAAQSKPAQRGGGSRPKNEESSGFGGKGGW
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtttctatcaacggccaggagcctcctcctgctcccctagcagatgcgccc
cctccgccaccgccgatggagttggacggtgttgctcctccgcctccagcagatatagag
ccgcctccgccacctggagaggcataccctcctcctcccccgcctacgcccgcgagtagc
agtgatggtgtcgtcaaaaagaataaatccggctggggttcctcgggcaaagctgctgct
gcaaaaccgctgagtgtggaagagttgctgcggaagaagagagaggccgatgcggctgct
tcaaagcccaagtttctttcgagagcggaacgtgagcgcctcgcattagagaaacgcacc
aaagaggtcgaagcggagcgacgcgcgaaaatcgagcagagtcgaccgacgaacggccaa
aatacctcgaatacaggaaatggagtttcgaaaaatggcgattctgcttctagatctatt
ccaaccggaccccgagctttgcgcactggtgataatatcccgacgggacctgctgctatg
cgaaatggacagtcgaacaacaacaatagagactacgatatgtcgccgccgccgccgccg
aaacgcattgcctttgggaaaaatgactcgaaagggaaaaagcccgcgatttcagaagaa
gaggcagagaatgcgttgattcgacaacggtatatgggcgcagaccaaacatcgaacttc
tcggcgaagaagaaacgcaagcgcactacggagaggaaattcaattttgaatggaatgca
gaggaggatacgagcggcgactataatcctttgtatcagcacaaggcagaggccaatttc
tttgggcggggtcgtcttgctggctttggagaagatgctgtggatagcgctacgaagaac
tatgtcaaggccattgaaattcgcgaccaagaagctggctcggctcgcgctagggagata
ttggagatggagcggcggcgaaaggaagagagcagtcggggtgctatcgacaagcactgg
agcgagaaacgcctcgaccagatgcgcgaacgagactggcgaatcttcaaagaagacttc
aacatcagtacgaagggtggaagcataccgaatccgatgcgctcatgggacgagtccaat
ttaccttcacgcttgcgggatatcatcagccaagtcggttatactgacccaagccccatc
cagcgcgcagccattccgattgcactgcagtcacgcgacctcatcggtgtggctgtgacg
ggttcaggtaagacggcggctttcttgctcccgttgctggtttatattgctgagttgccc
cggcttgatgagtttgaatggcggaagaacgatggcccatatgcgatcatcctagcacca
acccgtgaattggcacagcagatcgaaattgaagccaagaaattctccaagcaactcaac
ttcaacgttgtcagtatcgtcggtggtcactcgctggaagaacaggcgtacagtatacgg
gatggcgccgagattatcatcgcgacgcccggtcgtttggtcgactgtctggaacgacgg
atgctggtgctgtcacaatgctgttacgttattatggacgaagcagatcgaatgattgat
cttggcttcgaggaacccgtcaacaagatcctcgatgctctgccggtgactaacgaaaag
cccgatacggaagaggcagagaacgcgcaggccatgagccagcatatcagtggaagagac
aaccggtaccgccagacgatgatgtacacggccacgatgccgtcggccgttgaacggatc
gcacggaaatacctacggcggcctgcgattgtcacgatcggcaacgttggcgaagccgtg
gacacagtcgagcaacgggtcgaatttgtctcgggcgaggacaaaaagaagaagcgcctt
ggcgatatcctcatgtccgggcaattcaagccgcccatcattgtttttgtcaacatcaag
cgaaactgtgacgctgtcgccaaggatatcaaacacctgggcttcacgtcagtcacgctg
cacggtagcaagacgcaggaccagcgtgaggcggccctggcgtcggtgcgcaatggcagc
acggacgtcttggttgcgaccgatttggctggccgtggtatcgatgtgccggatgttagt
ttggtggtcaacttcaacatggcgaacaatatcgaaagctacacgcatcgtatcggtcgt
accggtcgtgctggcaagagtggtgtcgccattaccttcctgggtaatgaagataccgat
gtgatgtacgatctgaagcagatgctcgccaagtcttccatttctcgagtgcccgaagaa
ctacgcaagcacgaagcggcacagtccaagccggctcagagaggcgggggctcccggcca
aagaacgaggagtctagcggttttggaggcaaggggggttggtga
DBGET
integrated database retrieval system
