Talaromyces rugulosus: TRUGW13939_00730
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Entry
TRUGW13939_00730 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
trg
Talaromyces rugulosus
Pathway
trg03022
Basal transcription factors
trg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRUGW13939_00730
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_00730
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_00730
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRUGW13939_00730
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRUGW13939_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-C3HC4_2
zf-RING_2
TRAF3_RING
zf-RING_16
zf-RING_4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
DUF3797
Motif
Other DBs
NCBI-GeneID:
55988243
NCBI-ProteinID:
XP_035339830
UniProt:
A0A7H8QJC7
LinkDB
All DBs
Position
I:complement(join(2152073..2152922,2152983..2153223,2153290..2153332))
Genome browser
AA seq
377 aa
AA seq
DB search
MASDDDDAPRRDEDEVCPICKSSRYLNPDMRFLINPECYHRMCESCVDRIFSSGPNACPV
IGCKKTLRKARFRTQTFEDIGVEREVDIRKRVMGILNRREDEFDSKLDWDNFLEQRETMI
MNLVTGVDVAKTEANLRKYETSHLDSIRANKTRETQEASSFLEQQSFEQEQSRLRRQAAR
EEYEREQNDLVTGRENILSRLAAGGPGDAASIAREGQKVLLKKSSARRSEEERLRQKQAA
LRGEKKKGKGSALASGAAFRGDSDIEPSLIKGLKKVSIPEPEKPYDPFGGLGELDKKDYY
VLQDRYPSQWLEEARTSTTKAAGGFDIKEYYSRTLFEAFAGLGCFIEEEVSKRDAVSQPF
GFVNRGSAAVKRSDDVF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgatgatgacgatgctcctcgtcgggatgaggacgaggtgtgcccaatctgc
aaatcctcgagatatctcaacccagacatgcgtttcctcatcaacccggagtgctatcat
cgcatgtgcgaatcgtgtgttgatcgcatcttctcgtctggtccgaacgcgtgtccagtg
atcggctgcaagaagacattacgaaaagcgcgctttcgaacacagacgtttgaggatatc
ggcgttgaacgggaggttgatattcgcaagcgagtgatgggaattctgaaccgccgcgaa
gacgaattcgacagcaaactcgactgggacaacttcctcgaacaacgcgagactatgatc
atgaacctcgtcacgggggtagacgtcgccaaaaccgaagccaacctccgaaaatacgaa
acctcccacctagactctatccgcgccaacaaaacccgcgaaacccaagaagcctcatcc
ttcctggagcaacaatcctttgaacaagaacagtcgcggctccgccgccaagccgcgcgc
gaagagtacgaaagagaacaaaacgacctcgtcaccggccgcgaaaacattctctctcgt
cttgccgcgggcggtcccggcgacgcagcctcgatcgcgcgcgagggccagaaagtgctt
ctcaaaaaatcctcggcacggcgcagcgaagaagagcgacttcgacaaaagcaagctgct
ttgcgcggcgagaagaaaaagggcaagggatcggcactcgccagcggcgctgctttccgt
ggcgattcggacatcgagccgagtctcatcaagggcctcaaaaaggtgtctatccccgaa
ccagagaaaccctacgatccctttggtgggctcggggaactcgacaagaaagattattat
gtcctgcaggaccggtatccgtcacagtggcttgaagaggcgcgtaccagcactaccaag
gctgcggggggattcgatatcaaggaatactattcacgcacgttgttcgaggcctttgct
gggctgggctgttttatcgaagaggaagtctccaagcgggacgctgtgtctcagccgttt
ggctttgtgaatcgaggatctgctgcggtgaaacggtctgatgatgttttctaa
DBGET
integrated database retrieval system
