Talaromyces rugulosus: TRUGW13939_01124
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Entry
TRUGW13939_01124 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
trg
Talaromyces rugulosus
Pathway
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRUGW13939_01124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_01124
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_01124
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRUGW13939_01124
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
TRUGW13939_01124
U7-dependent histone pre-mRNA processing factors
TRUGW13939_01124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
55988637
NCBI-ProteinID:
XP_035340220
UniProt:
A0A7H8QKI5
LinkDB
All DBs
Position
I:join(3440217..3440548,3440655..3440820,3440881..3441011,3441063..3441266,3441330..3441678,3441726..3442534,3442600..3442670,3442734..3442864)
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AA seq
730 aa
AA seq
DB search
MAQVNLNDQLDQLQAARNLVLSDAALYPQVVQGILPIIGVSSALELRRWGSDFLAETFAN
PALPSTQKEQLATTVLPTLQELLDHDAEDMTVVQNVIQIAASLYTFVFRHVIRHQQEKTI
WEQMTAIKHNILGRMDSAPHPVRVCCIKFVQRVVHTQTPGPIADPRRPEKNETSIAIVPR
THAILVIPNLEAEASGLLDRLLTVLQENSDDAILVNATLNCLAVMLRTRSTIANKILETI
LNFNPIKTLNGPLTPTMRVKVKSMERTARAVLINVLKRNPNHPKAGKMQQYMERLAQSCT
EALDDTSRKRGPPAEPTDGLDNVKRAKLGVETPPLIKIPPLPPGPTSYAQLYTLTEDAGL
STFDVKQLPPDLIVKIAVAVLGRVDSNSLQQATEGIRARYQGLVAQQAKQTQVPAEEEDD
DYEPEYQPADVPVQEAEDTMPTIFGLEPELGPFKLPKPPPMTEDEAGEVGRAAAERVFEM
MVATPFKPAVKGPGTQSDRKGFARLAGGSFDTKEAWITMLVRMATRAPASLEGAAGKIEN
ADGRPTIATHIRELLYRHILEDFRSRINIGITWLNEEWYNDRLQMQNASSSRSKENENLT
VPLHYDSWVLRLLGGILPYLDARDNKVLIRFLSEVPEITSPILGHVQTLARDPERVTLCV
QTLHYLVMLRPPARELCLDTLEEIYNTHEEARPAAGKVLTRWRPHVIQAQKAQEAPQPSI
NNTNGVQTAT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtcaacctcaatgatcagctagatcagctccaggctgcgcggaacctggtg
ctgtccgatgccgcgctctacccacaagttgtccagggaatccttcccatcatcggtgtc
agttcggccctcgagctacgaagatggggctcggatttcctcgcagaaacattcgccaat
ccggcgctgccctcgacgcagaaagagcagctcgccacgaccgtgctcccaactcttcag
gaacttctcgatcacgatgcagaagacatgacggtggttcagaatgtgattcaaatcgcg
gccagtttatatacattcgtgttcagacatgtcattcgtcatcaacaagaaaaaacgata
tgggagcaaatgaccgcaatcaagcataatatacttggccggatggactccgcgccgcat
ccagtgagggtgtgctgcatcaaatttgtgcagagagtcgttcatacccaaacgcccggg
cccatagcagatccaagacggccggagaaaaacgagacgtccatcgctatcgtcccccga
actcacgctatactcgtgatacccaacttagaagcagaggcatcggggctattagatcga
ctcttgacagtgctccaagagaactcagatgatgcaatcttggtgaacgcgacgttgaat
tgtttggccgtcatgcttcgaactcggtcgacaattgcaaacaaaatactcgaaactatt
ctgaatttcaaccctatcaaaacattaaatgggcctttgactccaactatgcgtgtgaag
gtcaagtcgatggagcgcacagcccgtgctgttctaataaacgtgttgaaaaggaacccc
aatcatccaaaggctgggaaaatgcagcagtatatggaacgacttgcgcagagctgcaca
gaggctcttgatgatacatctcgaaaacgcggcccgcctgcggaaccgacagacggtcta
gataacgtcaagagagccaagcttggtgttgagaccccgcctttgataaaaatacctcct
ctccctccgggtcctacgagctatgcccaactttacactcttactgaggatgctgggctt
tctacttttgatgtcaaacaactaccaccggatcttattgtcaagattgctgttgctgtg
ctcgggagagtagattctaattcattacaacaagcgacagaaggtattcgagctcgatac
caaggccttgttgctcaacaagcaaaacagacccaagtgcccgccgaagaagaagatgat
gactatgagccagagtatcagccagcagatgtccctgtacaggaagcagaggatacgatg
cccaccattttcgggctcgaaccagaattaggaccattcaaacttcccaagcctcctccc
atgaccgaggatgaagcaggcgaagtcggccgagccgccgccgagcgagtctttgagatg
atggtggccacccctttcaaaccagccgtcaagggccccggaactcagtcagaccgcaaa
gggttcgcgcgtcttgcgggaggatcctttgacacaaaagaagcatggataaccatgctc
gtacgcatggcgacacgagcgccagcgagcttggaaggcgccgcagggaaaatcgaaaac
gccgatggcaggcccaccatagcaacacacattcgcgagcttttgtatcgccatattctc
gaagatttccgctccaggatcaatattggcatcacgtggctcaatgaagaatggtacaat
gacagattacagatgcaaaatgcgtcgtcgtctcgctcgaaagaaaatgaaaacttgacg
gtgcctctgcactacgactcttgggtcttgcgtcttctcggcggtattctaccgtatctc
gatgcccgcgataacaaggttcttattcgcttcctcagcgaggttcccgaaatcacgtcg
ccgattctcggccatgttcagactcttgcccgtgaccctgagcgcgttactctttgtgtg
cagactttacactatctcgtaatgctcagaccaccagcgcgagaattatgtttagataca
ttggaggagatctacaacacccacgaagaagcacgccccgcagccggtaaagtgctaact
cgatggcgaccacatgtcatacaagcacaaaaagcccaagaagcaccacaaccatcaatc
aacaatacgaatggcgttcaaactgcgacttga
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