Talaromyces rugulosus: TRUGW13939_01167
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Entry
TRUGW13939_01167 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_01167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_01167
Spliceosome [BR:
trg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TRUGW13939_01167
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
HSCB_C
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Vps41
DnaJ
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_like
DUF3824
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
55988680
NCBI-ProteinID:
XP_035340263
UniProt:
A0A7H8QJG2
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Position
I:complement(join(3568297..3569211,3569368..3570845,3570910..3570985))
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AA seq
822 aa
AA seq
DB search
MMHPARQAYVEEAADDDAGIDLADIPVDRDYDMPAAAAGIAPERASALMSQFDRKRRAAA
INVPTDDNRVRLKLRELGEPITLFGEGPSDRRDRLRELLTTLEEQQGGDVEMREATEETE
TLEAEEEGEQQEEFYTEGSPDLLEARKKIALYSLPRAKARVASQQEQSTIHLRTHIKHRK
AVKEKLQGFELYGSQIAADRPVSITRFSPDGQSLATGDWTGGVKVLTVPNLEEKLSVKGH
TDRVSGISWFPGATLPDSNVSESSLNLASGGGEGNINLWSLDKKQPLSTLSGHSERVCRV
EFHPSGQYLASASYDTTWRLWDVETTTELLLQEGHSREVYAVSFNSDGSLLASGGLDSHG
RIWDLRTGRTVMVLQGHIREIYGVDWGADGYRVLTSSGDGWVKCWDLRKVDCSGSIGAHK
SVVSDVRWYKGGDSSHSYLPSTGAEKGDAMVTDEAAPAPTPRKAGTFFVSSGFDRNVNVF
SADDWSMIKSLTGHSDKVLSVDISHDARWIASASHDRTRLSGMRRRPKQAEAEAKLTFDL
ASSPHSLPIDSCPLQFIMRGAALWLRPQRLMPSARGQLSPLSMRPLATCLSCRYAYASKQ
SALLQQRRASSSYRDSYPDSSSTRSSPPDIDTTNYYTLFPSTLPYGPPPNSFFTFNTSAL
RREFLELQGATHPDKFPQGPDKQRAETLSARLNDAYRTLCDPLTRAQYLLAEFHGIDVLA
EDGSGTSRAGLDPETLMEVMDAQEKVEELSNVPAAEAEKVVKKLRNANADRIETTVERLA
SSFDISDIERAHTETVRLRFWYSLRDGLREWEPGHGEIRIVH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccccgcgcggcaggcgtacgtggaggaggccgccgacgacgatgcgggcatt
gatctcgccgacattcctgttgaccgcgattatgacatgcctgccgccgccgcaggcatc
gcccccgagcgagcatctgccctaatgtcacaatttgatcgaaaacgacgagcggccgcg
atcaacgtgcctaccgacgacaaccgcgtgcgcttgaagctgcgcgagctcggggaacct
atcacgctgtttggcgaggggccgtcggaccgacgagatcggctgcgagagctgctgaca
acgttggaagaacagcaaggcggtgatgtcgaaatgcgcgaggctaccgaagagacggaa
acgctggaggccgaggaagagggagaacagcaagaggagttttatacagaggggtctccg
gatctattggaggcgaggaagaagattgcgctatactcgttaccccgagcaaaggcgcgg
gtagcgtcgcagcaagaacagtcgactatacacctacgaacgcatattaaacatcgcaag
gcggtcaaggagaaattacaaggttttgagttatatggatcgcaaatcgctgctgaccgg
ccggtcagtatcacacgattttccccggacggccagtcacttgcgacgggtgattggacg
ggcggggtcaaggtgttgacggtgccaaacctggaagagaaactcagtgtcaagggccat
acggatcgagtgagcggaatttcgtggtttcccggtgctacattgccagattcgaatgtg
tcagagtcttcgttgaatttggcgtcgggaggaggcgaaggtaatatcaacctttggtca
ctagataagaaacagccgttatctacactgtcagggcactcggaacgtgtttgtcgagtg
gaatttcacccttcgggccagtatctggcatcggcttcatacgacacaacatggcggctg
tgggatgttgaaacgacgacggaattgctactacaagaaggccattcccgcgaggtgtac
gccgtttcattcaactcagacggatcccttctagccagtggaggtttggatagtcacgga
cgtatctgggatcttcgcactggccgaacggtcatggttctccagggtcacatccgcgaa
atctacggcgtcgactggggcgccgatggataccgagtgctgacgagttcgggagatggc
tgggttaaatgctgggatcttcgcaaagtcgactgcagtggtagcattggagcacacaag
agcgtcgtttcggacgtgagatggtacaaagggggcgattcatcgcattcatacctcccg
tcaacaggggcagagaaaggcgatgctatggtgacagacgaggctgcaccggcgccgacg
ccgcgaaaggcgggcacattcttcgtcagttcagggttcgatcgaaacgtcaacgtgttt
agtgcagacgactggtcgatgatcaagtcgttgacaggacattcggacaaggtgctcagc
gtggatatcagccacgacgcgcggtggattgccagtgccagccatgatcgaacgcggcta
tcggggatgcgacgcagaccgaaacaagccgaagccgaagccaaactcacctttgacctc
gcgagctctcctcattctttgcctatagactcttgcccactccaattcatcatgcgagga
gcagcactgtggctccggccccagaggctgatgccttctgctagaggacagctgtcacca
ctctctatgcggcccctcgcgacgtgcctgtcatgccgatacgcctacgcctccaaacag
tctgctctgctgcagcaacgacgcgcatcatccagctatcgagacagttatccggacagt
tcttcaacacgcagcagtcctcctgatatcgacaccacaaactactataccctgttccca
tcgacactcccctacggcccacctccaaactcattctttacattcaacacctcggcgctg
cggcgcgagttcctcgaactccaaggcgcaactcacccagacaagttcccgcaaggcccc
gataaacagcgcgccgagaccctgtcggcgcgcctcaacgacgcctaccgcacgctatgc
gacccgctcacgcgcgcgcagtaccttctcgcagagttccatggcatcgacgtgctcgcc
gaagacggtagcgggacatccagggccgggcttgacccagaaacgctcatggaagtgatg
gatgcgcaggagaaggtcgaggagctgtcgaacgtgccagctgccgaggccgagaaagta
gtcaagaagttgagaaatgccaatgcggatcgcattgagacgacggtggaacggctcgca
agctcgtttgatatcagcgatatagaaagggcgcacacggaaacagtgcgcttgcggttc
tggtatagtctaagggatggcctgcgcgagtgggagccgggtcatggcgagattcgcatt
gttcattga
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