Talaromyces rugulosus: TRUGW13939_01340
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Entry
TRUGW13939_01340 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_01340
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_01340
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRUGW13939_01340
Spliceosome [BR:
trg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TRUGW13939_01340
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
Helicases
TRUGW13939_01340
Pre-60S particles
TRUGW13939_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
55988852
NCBI-ProteinID:
XP_035340434
UniProt:
A0A7H8QL72
LinkDB
All DBs
Position
I:join(4007195..4007656,4007714..4007939,4007989..4008061,4008114..4008441,4008495..4008524,4008571..4008729,4008777..4008957,4009015..4009023,4009077..4009348)
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AA seq
579 aa
AA seq
DB search
MSKDKMASSKEHSKKVKRRHDTSEDGSKSSKHRSSEKQDKPKKQKTVPEETQDDPVEDPT
ELDQEVEYEKTDESAEQDNLADLPSANAVSLPQTGESMPVKFTDLTLSEKTMEAIKEMGF
ETMTEIQQRAIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGVLILSP
TRELALQIWGVARQLLDKHTQTHGIVMGGANRRAEAEKIEKGVNLMVATPGRLLDHLQNT
KGFVFKNLRQLVIDEADRILEIGFEDEMKQIIKILGNGERQTSLFSATQTTKVEDLARIS
LRQGPLYINVVPRLENATVDRLEQGYVMCEPDKRFLLLFSFLKRNLKKKVLVFFSSCNSV
NYYSELLNYIDLPVLSIHGKQKQQKRTSTFFEFVNSERGILICTDVAARGLDIPEIDYVV
QYDPPDDPRDYIHRVGRTARGAKAKGRSLMFLQPSEMGFLTHLKEAKVPVVEFEFPQKKI
INVQSQLEKLISQNYYLNKSAKEGYRSYLNAYASHSLRSVFDVNRLDLVKVARSFGFSTP
PRVDITLGASMSRDKKAPTRRAYGSQPKQAARFKRKRDD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagacaaaatggcgtcttcaaaggaacactcgaaaaaagtgaagcgccgtcac
gacacttccgaagacgggagcaaatcgtccaagcaccgatcaagcgaaaagcaagacaag
cccaagaagcaaaagaccgtccccgaagagactcaagatgatcccgttgaagatcccacc
gaattggaccaagaagtcgaatatgagaaaaccgacgaaagtgctgaacaggacaatctt
gcggacctcccatctgccaatgccgtttcgctgccccagaccggcgagtccatgccggtc
aaatttaccgacctgacgctgtcggaaaagacgatggaagctatcaaggaaatgggattc
gagaccatgactgaaattcagcaaagggccattccgcctttgatggctggtcgcgatgtg
ctcggagctgcaaagaccggatcggggaagacgttggctttcttgatccctgccattgaa
ttgctacacagcctgaagttcaagcctagaaacggtaccggtgtgcttatcctgtcgccg
accagagagcttgcgctgcagatttggggtgtcgctcgacaattgctggacaaacacacc
caaacacatggaattgtgatgggaggagccaacagaagagcagaagctgagaaaattgag
aagggtgtcaatttgatggtcgcaacccccggacgcctactcgatcacttgcaaaataca
aagggattcgtatttaagaatctgcgccaacttgttatagatgaagcggatcgtattttg
gaaatcggtttcgaagacgaaatgaaacaaattatcaaaatcctcggcaacggagaacga
cagacatccctcttctcggccacacagacgaccaaagtcgaagatctggcccgcatctcg
ctcagacaaggcccgttgtatattaacgtcgtgccacgtcttgaaaacgccactgtcgac
cgactcgaacagggctacgtaatgtgtgaaccggacaagcgattccttttgctattctct
ttcctgaagaggaacctgaaaaagaaggtccttgtcttcttctcgagttgcaactcggtc
aattactactccgagctcctcaactatatagatcttccggtcttgtcgattcatggcaaa
cagaaacagcaaaaacgcacatccaccttttttgagtttgttaacagcgagagaggtatc
cttatctgcactgatgtggctgcacgaggtcttgatattcccgagattgattatgttgtc
caatatgatcctcctgatgacccacgcgactacatccaccgagtcggtcgtactgctcgt
ggcgccaaagcaaagggtcgcagtctgatgtttttgcaaccgtccgaaatgggattcctc
acgcatttgaaagaagcaaaagtaccggtcgtcgaattcgagttcccgcagaagaagatt
atcaacgttcaatcccaacttgaaaaacttatctcccagaattattatctcaacaaatcc
gccaaagaaggctatcgctcgtacctcaacgcatacgcatcacactctctgcgttcggta
ttcgacgtcaacagactggatcttgtcaaggttgcaaggagcttcggattctctacacca
cccagagttgatatcacactcggagccagcatgagcagggacaagaaggcgccaacaagg
agagcatacggtagccagcccaaacaggcggcccgcttcaagcggaagcgtgatgactga
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